Gene Mbar_A3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3572 
Symbol 
ID3626501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4584413 
End bp4586140 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content44% 
IMG OID637702403 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_307020 
Protein GI73671005 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0481418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGA GTCTGCTTAA AATCAATGAT CTTAAATGCC ACTATCTAAC TGACGTTGAT 
ACCATTAAGG CTGTTGACGG TATTTCTTTT GAGATTGAAG AAGGAGAAAT TCTGGGCATT
GTCGGAGAAT CCGGCAGTGG CAAGACCACC GTTGCCCTCG GGATTATGGG GCTTTTGCCG
GAAAATACAG CTATTTCCGG AGAAATTTTT TACAGGGATG AGCTAATCTC CTCTTTGCCT
GAATCTGAAA TGGACAAATT CAGATGGAAT GATATTGCAA TAGTTTTTCA GAATAGCCTT
GAGGTGTTGA ACCCTGTTAT GAAAGTGGGC GTTCAAGTAA GAGAACCGAT GATAAGGCAC
TTTGATATCA GTCCTGAGAA AGCACAGAGT AAATGTGCTG ATCTGTTCAG GACGGTTGGC
CTTGATCCTA AATGGATGGA TTCATATCCG CATCAGCTTT CCGGAGGTAT GAGGCAGAGG
GTTCTTCTGG CAATGGCTCT TTCATGCGAC CCGAAATTGC TGATTCTCGA TGAAGTTACT
TCTGCTCTTG ATGCATTTAC CCGAAAGGAA ATCAGGGACC TTCTTATCGA CCTTCAGAAG
AAGAACGGGT ATACGATGTT AATGATCTCT CATGATATCA CTTTTGTGTC TTCTGTTGCG
TCCAGAATTG CTGTTATGTA TTCAGGAAGG GTTGTTGAAA CAGGACCTGT AAGGGATATT
CTCGTATCTC CCCGTCATCC TTATACAAGG GGCCTTGTCC ACTCGACCCC GGATATTTTT
GTTTATAAGG ATTTATGGGG AATTCCGGGC GATGTACCTG CAGGGGATGG ATTTAAGGGC
TGTCCTTTCA GCCCGAGATG TACACAAAAA ATCGATATCT GCAGTAAAGT TTCCCCGGTT
CTGACGCCGA TAGGAGATGG AAGGGAAATT GCATGCCATA GAGGGGGAAT AGCAGACGTT
CTGGAAGCCA GAAACTTGAG TTTCAGCTAT CGTCTGCCTA ATGGAGAATA TCTTCAGGCA
GTTGAGAATG TTAATCTGGA AGTGAGGGAA GGAGAGGTTC TTGCAATTGT TGGTCAGACC
GGTTCAGGAA AGTCAACGCT TGCACATATC CTTGCAAACG TAATAAGGTC CGAGCGCGGA
GAAGTATTGT TTATGGGTGG GAATGTTGGT GAAGGAAATT ATGGAAGCAG GTTCAACGGC
ATTCAGATAG TATTTCAGGA CCCATTCAAT TCAACCAGCA ATAGGTTTAC TGTGCTTGAT
GCAATCAAAG AGCCTCTTTA TATCAATAAG ATCGGGTCCA ATGGAGATAG ACTGCAAATG
GTTAAAGGTG CCCTTGAACT TGTTCGTCTT CCCAGTACTG ACAATTTCCT CAGCAAATAT
TGCGGGGAAC TCAGCGGCGG GCAAAGGCAG AGGGTTGCAC TTGCAAGAGC AATGGTTATG
GAGCCGAAAC TTCTTATTGC CGATGAGATA ACGTCGGCTC TGGATGTTTC AACCTCTGCA
AATATATTGC GTCTTTTAAA GGGCCTTCAG AACAGGAGAG GATTTGCAAT GATATATATT
TCACATGATC TCTCCCTGAC ACTGAAGATT GCTGACAGGA TAGCCGTTAT GAATTCCGGA
AAGATTGTAG AGATGGGGAA TTCCCACGAT GTTATGCTTT CACCTTCTGA TGAGTATACA
AAAAGGCTTG TGGGTTCAAG AATAGGACTG TGCTGTCATA CTCATTAA
 
Protein sequence
MIMSLLKIND LKCHYLTDVD TIKAVDGISF EIEEGEILGI VGESGSGKTT VALGIMGLLP 
ENTAISGEIF YRDELISSLP ESEMDKFRWN DIAIVFQNSL EVLNPVMKVG VQVREPMIRH
FDISPEKAQS KCADLFRTVG LDPKWMDSYP HQLSGGMRQR VLLAMALSCD PKLLILDEVT
SALDAFTRKE IRDLLIDLQK KNGYTMLMIS HDITFVSSVA SRIAVMYSGR VVETGPVRDI
LVSPRHPYTR GLVHSTPDIF VYKDLWGIPG DVPAGDGFKG CPFSPRCTQK IDICSKVSPV
LTPIGDGREI ACHRGGIADV LEARNLSFSY RLPNGEYLQA VENVNLEVRE GEVLAIVGQT
GSGKSTLAHI LANVIRSERG EVLFMGGNVG EGNYGSRFNG IQIVFQDPFN STSNRFTVLD
AIKEPLYINK IGSNGDRLQM VKGALELVRL PSTDNFLSKY CGELSGGQRQ RVALARAMVM
EPKLLIADEI TSALDVSTSA NILRLLKGLQ NRRGFAMIYI SHDLSLTLKI ADRIAVMNSG
KIVEMGNSHD VMLSPSDEYT KRLVGSRIGL CCHTH