| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3568 |
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| Symbol | |
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| ID | 3626497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4580928 |
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| End bp | 4581911 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637702400 |
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| Product | oligopeptide ABC transporter, permease |
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| Protein accession | YP_307017 |
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| Protein GI | 73671002 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0709186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAATG ACAGGAATTC GTTTATCTTC AGGTTGTTAT CGACAATTTT TGTAATTCTT
GTCATTAATT TTTTTCTACC AAGGATGATG CCTGGAGATC CATTCTCAAC AACTTCTGCA
GATGAAGTAG GGGAAGATAT TATTGTAATG ACAGAGGAGC AGCGTCTTTA TTACATAAAC
TATTACGGAC TTGACAGGCC ATTGCCTGAA CAATTTTTAG CATATATGAA AAACCTGATG
ACTGGCGATC TTGGAAGGAG TATTTATTAT AAAATGCCGG TCAGTGACGT AATAATGCTC
CATCTTCCCT GGACTATGTT TATTGTCATG AGTGCTACAG TAATCAGTAC AATCTCTGGT
GTAGTTCTTG GAACACTTTC GGCAAAGAAC CGGAAGAAGG GGAGTGATAG AATTATGATG
ACGGGTATGA TTGCCTTTGC AGAAATTCCT TCCTTTCTGC TTGGCCTGAT CCTTCTTCTG
ATTTTTAGTG TATATCTCAG GCTTTTTCCA CTTGCAGGCG CTGTTACCCC CTTCGCAAAC
TATAATGGTC CTGCAGAGCA GATACTGGAC ATATCGTACC ATGCCTTTCT GCCTGTTCTG
ACTCTATCAC TTTCACAACT GACCGGCGTG TACCTGCTCA CCAGAAATAC ACTGATTACA
GTGATCACAA AGGATTACAT CCGGACTGCC AGAGCCAAAG GTCTGGGTGA AAAAAGCGTT
TGGATCCGGC ATGCACTCCG AAATGCACTA CTCCCGGTAG TGACAAGAAC AGGTTTTACG
ATCGGCATAA TGATGGGGGG TGTTGTACTG GTTGAGAATG TATTTTCTTA TCCAGGCATA
GGGATGACAC TCAGAAGTGC TGTCGTCGGC CGGGATTATC CGCTTATTCA GGGTATTCTC
CTGGTAATTG CAGTCTCCAT ACTTATCTGC AACCTTCTGG TTGACAAAAT ATACGGGAAA
CTTGATCCGA GGGTTGTGAT ATAA
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| Protein sequence | MVNDRNSFIF RLLSTIFVIL VINFFLPRMM PGDPFSTTSA DEVGEDIIVM TEEQRLYYIN
YYGLDRPLPE QFLAYMKNLM TGDLGRSIYY KMPVSDVIML HLPWTMFIVM SATVISTISG
VVLGTLSAKN RKKGSDRIMM TGMIAFAEIP SFLLGLILLL IFSVYLRLFP LAGAVTPFAN
YNGPAEQILD ISYHAFLPVL TLSLSQLTGV YLLTRNTLIT VITKDYIRTA RAKGLGEKSV
WIRHALRNAL LPVVTRTGFT IGIMMGGVVL VENVFSYPGI GMTLRSAVVG RDYPLIQGIL
LVIAVSILIC NLLVDKIYGK LDPRVVI
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