| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3566 |
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| Symbol | |
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| ID | 3626495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4578374 |
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| End bp | 4580062 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637702398 |
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| Product | dipeptide/oligopeptide-binding protein |
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| Protein accession | YP_307015 |
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| Protein GI | 73671000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.672958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0864129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAA AAAAGTTATT ATTTTCTATT TTCTTGACAG CCCTGATTTT AATAACGGCG
GGCTGCGCTA ATAAGGACAG CCCTCAGGCC GGGACATCGG CTGAAAACGC TTCTGATCAG
ACCGGAACAT TGGTTGAGAA CCCTTCCGAC GGATCAAAGT ATGTGAATGT TGTTAATCTA
AGCGGCGGGG ATTATGGCTA TCCACAGCCA TTTTCGATAT ATCCGAGAGG TCCTGGGTCA
TCAAAAGTTG GAATGATCTT TGACAGTCTG TTCGAAAGGG ATGAAAAAGG TATAATTCCC
TGGCTGGCTG AAAGCTGGGA TGCCAATTCA AATGGAACAG AATATACAGT TTATCTCCGT
GACGGTGTCA ACTGGAGCGA TGGAGTGCCT TTTACGGCAA ATGATGTTAA ATTTACTTTT
GATTATGAGC AGAAAAATGT ACCCATATCA GGTGGAATTG AGTCCGGTAT TATAGATAAT
GTTCAGGTCG TGAATTCCAG TACCGTCAAG TTCGTACTCA CGCAGCCTGC TTCTCCATTT
ATTTATAAGG TCACGAGTTT CAAAATCATA CCTGAGCATA TCTATAAAAA TGTCTCCGAT
CCTACCAGTT TCCTTGACCC AGAAGCAGTC ATCGGTACTG GCCCGTTCAT TCTTGATGAG
TACAACAAAG AGCATGGAAC ATATCGGTTT GTAGTAAATG AGAATTTCTG GGGACCGGAA
CCTGCCGTTA AAGCCGTTGA ATTTATTCCG GTCAGCGACT CATTAATAGC TTTTGAACAA
GGACAAATAG ATTTCACAAG TATATCGCCT GATACTCTTG ACCGGTTCAA ATCAGATTCT
GATATAAGAA TAGTCCAGCA GCCGGCTTTC TGGGGTTACC AGTTTTATTT CAATATGAAA
AACTGTCCTG AGCTGAATGA CAGTAGAATA AGGCAGGCCT TTGCTTACGC CATTGATCGC
GATGAACTGG TGGAAAAGAT CGCAAGAGGT GCAGGGAAAG CCGGTAAAAT GGGCATACTC
CCTGAAGACC ATATCTGGTA TAACTCTGAC CAGCCGAAAT ATGACTACAA TCCGGATAAA
GCCCGAGCAT TGCTTGAAGA AGCCGGATGG ACTGACACAG ATGGGGATGG GATACGTGAT
AAAAACGGGG AAAAACTGTC ATATGTATTA TCTCTTGGAT CATCTGCTGC TGGCAATAGC
GAAGTCCGTA TCGGCGAACT TATAAAAGAG AGACTAAATG AAGTAGGAAT TGACGTTCAG
GTAAAAGCCC TTGAGAGCAA ATCCCGTGAT GCCAATCTAA AGAGCGGAGA CTTTGAACTT
GCGATCAGCG GCTTTGGCGG CTGGGGACAG GATGCAGATT ATCTCCGTAC AAGATACTGT
GACACAGGTG CACAGTCAGG AAGTGTATCA TCTGGAGCAG CAGTATTTGG TTACCACAAC
GATACCCTGA ATGATCTTGG TGCTCAGGAA TTACAGGAAT TGAACGATGA TAAACGGAAA
GAAATAGTAT ACAATATGCA GACCGTGCTT GCTAATGATG TACCCGCAAT ACCGCTCTAT
TATACTACAT CATATGATGT ATGGCGCATT TCAAAATATG ACGGCTGGAT GAATAGGTAC
GATCACCATG CAAGAACACA CAATATTCTT TCGTATTTAG AGAGGGATGG AATTGCAGCA
AAAAGATAA
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| Protein sequence | MEKKKLLFSI FLTALILITA GCANKDSPQA GTSAENASDQ TGTLVENPSD GSKYVNVVNL
SGGDYGYPQP FSIYPRGPGS SKVGMIFDSL FERDEKGIIP WLAESWDANS NGTEYTVYLR
DGVNWSDGVP FTANDVKFTF DYEQKNVPIS GGIESGIIDN VQVVNSSTVK FVLTQPASPF
IYKVTSFKII PEHIYKNVSD PTSFLDPEAV IGTGPFILDE YNKEHGTYRF VVNENFWGPE
PAVKAVEFIP VSDSLIAFEQ GQIDFTSISP DTLDRFKSDS DIRIVQQPAF WGYQFYFNMK
NCPELNDSRI RQAFAYAIDR DELVEKIARG AGKAGKMGIL PEDHIWYNSD QPKYDYNPDK
ARALLEEAGW TDTDGDGIRD KNGEKLSYVL SLGSSAAGNS EVRIGELIKE RLNEVGIDVQ
VKALESKSRD ANLKSGDFEL AISGFGGWGQ DADYLRTRYC DTGAQSGSVS SGAAVFGYHN
DTLNDLGAQE LQELNDDKRK EIVYNMQTVL ANDVPAIPLY YTTSYDVWRI SKYDGWMNRY
DHHARTHNIL SYLERDGIAA KR
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