Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3560 |
Symbol | |
ID | 3626489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4568108 |
End bp | 4568971 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637702392 |
Product | MerR family transcriptional regulator |
Protein accession | YP_307009 |
Protein GI | 73670994 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0789] Predicted transcriptional regulators [COG4978] Transcriptional regulator, effector-binding domain/component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.453881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAAGA TGTCAGTAGA TCAAATTCCA ATCGGTAAGT TTTCTTTCAT GACTCGCCTC TCACAAAAAG CACTCCGTCT CTATGACCGG AAAGGGCTGC TTGTTCCGGA AGCAAAGGAC CCTTTTACGG GATACAGGTA CTATACCGTT TCCCAGCTGG AACAGGGAAT GAAAATTAAA ACTCTATGCT TCCTCGGATT TTCCTTGGAA GAAATTTCCC TGTTTCTGGA TGCGGAAAGC AAAGGAGACT TCGAGTACAT AGGAACAGGC TTCAGGAAGA GACTTGAGCA AACTCGACTG GAAATAGGAC AGCTGCAAAG GATCGAAGGG ATCTTGCAGG GCGCCTGCAA ACACAATGGA AAAGTTATGG AGTTATTCAA AATGTCTATT ACAGAACCCG TTATAAAGGA AATACCCGAG ATGCGAGTAA TAAGCAAGCG TGAAAAAGGA ACTTTTGTGG CAACTATTGG AAAACTTATA GGTGAAATCT GCACAAGTGT CGGCAGCCCT GAAAACCAGC GAAACCGTGT AAAAGTTACA GGTCCTGTTA TGTTCCTCTG CCATGATGAA GAATACAAAG AAATAGGGGC TGATATCGAG ATCGCCCTGC CTGTATCTGG CAGGATCTCA GTCGAAGACC CGAAAATGGA AGTGAAAACA CTGCCTGCTA TAAGAGCTAT CTCAGTGGTC TACCGGGGCC CGTATCCGGG AGTCGAAGCT GGTTACAACC AGATTTTCTC GTATGCCAGA GAGAATAACC TGGAAACCTT GAGCCCTGAC AGAGAATTGT ATTTCAATAG CCCTGAAGAA GTTCCTGAAG AAGAGCTTAT GACTGAAATT CAGGTCCCGA TAAGGGAGAA GTAA
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Protein sequence | MSKMSVDQIP IGKFSFMTRL SQKALRLYDR KGLLVPEAKD PFTGYRYYTV SQLEQGMKIK TLCFLGFSLE EISLFLDAES KGDFEYIGTG FRKRLEQTRL EIGQLQRIEG ILQGACKHNG KVMELFKMSI TEPVIKEIPE MRVISKREKG TFVATIGKLI GEICTSVGSP ENQRNRVKVT GPVMFLCHDE EYKEIGADIE IALPVSGRIS VEDPKMEVKT LPAIRAISVV YRGPYPGVEA GYNQIFSYAR ENNLETLSPD RELYFNSPEE VPEEELMTEI QVPIREK
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