| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3554 |
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| Symbol | |
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| ID | 3626483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4563102 |
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| End bp | 4564088 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637702386 |
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| Product | cell surface glycoprotein |
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| Protein accession | YP_307003 |
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| Protein GI | 73670988 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00624743 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.690618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGA AGCCAGTCGC AATTTTACTT AATCTCCTGC TGCTCACGGT TCCAGCTTCA
GCTTCGTATG CCGGAGACAA ACCTTTGCAG ACAGTACTCC ATGACGAACA CTATGGAGGT
CTCGATTTTT CTCTCGGGGA TAGTAAATAT AGCGGTGAGC TTGAATACAA CAAAAGCTAT
ATGGTTAACT TTAGTGTTAA TCTTCCTGCA GAGGGTTCTG TTAAGGTTGC AAAAGCTTAC
GTTTACTGGG TCTGGAGTAA AAAAGATCTG GAAGGCATAT ATCCGCAATT CAATGCTTCC
ATTATAAATT CAGAAACTAC TGCGCCCCTT CCTAAGGGAC ACATGTATAC GGACACAAAG
GGATTTGTGT CAAGATATGA TTATTTCTCG GGGATGAACA CATATGACCT TAGTGGGAAG
ATTTCCAAAT CCGGAAATTA TTCCATCTCA CTGGTGAATA CGGACAAAAA CGGAAGTACC
TTTTGCGTAC AGGGTATCGG GCTTCTTCTC GTCTACGAAG ACCCCAAATC ACCAGCTATC
GAATACTGGA TTAATGAAGG CTGTGATATG CTGTATGCCG ATTATGGGAT TACTCCAGAA
GTAGCAACAA CAACCACTTA TTTTAAAGGG GATATTGATC CCGATAATGT CACAGATGCA
CGTTTGATAA CAGTTTCGCC TTCGGGAGGC TACAGTTCAG GCAGAGAAGC AAGGAATAAG
CTTTTTTTTA ATGAGGAGAC TCGTAGTATT CCAGTTCTGG GAGATATCGT CCAGCTTCTG
TTTGGAAGTG GTAAAGTCTG GGAGAACGTA TACCAGACAA ATGAGACTGT CCAGATTGCT
CTGGACGAGA AGCCGGTAGC AGATTATCTG GAGCCAACTG AAAATTTTGC TAGTATTCAG
GACAATGGGG ACTATCTTCT GGCAACAAAT GCAATACTTG TGCTTAAGTT TAAAGGGCCT
GAATCCTCTG AAACAAAAGG TAGCTGA
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| Protein sequence | MNLKPVAILL NLLLLTVPAS ASYAGDKPLQ TVLHDEHYGG LDFSLGDSKY SGELEYNKSY
MVNFSVNLPA EGSVKVAKAY VYWVWSKKDL EGIYPQFNAS IINSETTAPL PKGHMYTDTK
GFVSRYDYFS GMNTYDLSGK ISKSGNYSIS LVNTDKNGST FCVQGIGLLL VYEDPKSPAI
EYWINEGCDM LYADYGITPE VATTTTYFKG DIDPDNVTDA RLITVSPSGG YSSGREARNK
LFFNEETRSI PVLGDIVQLL FGSGKVWENV YQTNETVQIA LDEKPVADYL EPTENFASIQ
DNGDYLLATN AILVLKFKGP ESSETKGS
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