Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3551 |
Symbol | |
ID | 3625961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4558139 |
End bp | 4559002 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637702383 |
Product | cobalt ABC transporter, permease protein |
Protein accession | YP_307000 |
Protein GI | 73670985 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0401892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.225242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAAGCC TTTTTCGTTA TGAACAAAAA GATAGCCTGC TCCACAGGCT TGACCCGAGA GTTAAACTGC TCTGGCTCTT TGGAATTTCG GTGCTAAGTG TTGTTTTCGG AACTCCTGAT TTATTGGCAA TATTATTCAT ATCAACTTTA CCTTTCTGGT TTATATTAAA GCCCTCAAAA AGCAGGATAA AAGCAATGCT TATTATCTTC GGGAGTGTCC TGTTAAGCTT TACAATATCA CAGGCTTTTT TTTATTATTG GGCCAAAGAG CCGTTGTTTA CTCTTATTCC ATCTTCTTTC CCACTGGTGG GACCTCTTAC AGGAGGGATC TATTTCTATG CAGACGGAGC TATCTATGGA CTGTATCAAT CTTTCCGTGT TATGGCTTCT CTAAGTGCTG CTATGCTTGT TATTGCCACA ACTCATCCCG GAATGCTCAT CGATGCATTT GTTCGTTTTT TCGAAATTCG GATCGCAGGG AAACGTTATA GAATAGGCAT TCCATACGAA ATTGCATTTA TGGTATCCTC TGCAGTCAGC TTTGCTCCTA CAATGCTCGA AGAAAGCAGC ATAATCCTCA ATGCAATGCA GGCAAGAGGA CTTGAGCTGA AAGGTGATAT CCGTAGAAAA GCAAAAGCCC TGAAATATAT CCTTGTTCCT CTCGTAGTTA ATATACTCAG GGCAGGAAGA AAGCTTGCCA TTGCTGCCGA CACCCGAGGC TTTCGAGCAA ACAAGCACAG GACCTACGTA AACGAACTCA AATTAAAAAG GAATGATTAC ATCTTTCTGA TATATACAAT CCTTTTAACG TCAGGTGGGC TTTATCTAAG CTACAAGGGT TTCGGGGGCA CAGTACCTGT TTGA
|
Protein sequence | MKSLFRYEQK DSLLHRLDPR VKLLWLFGIS VLSVVFGTPD LLAILFISTL PFWFILKPSK SRIKAMLIIF GSVLLSFTIS QAFFYYWAKE PLFTLIPSSF PLVGPLTGGI YFYADGAIYG LYQSFRVMAS LSAAMLVIAT THPGMLIDAF VRFFEIRIAG KRYRIGIPYE IAFMVSSAVS FAPTMLEESS IILNAMQARG LELKGDIRRK AKALKYILVP LVVNILRAGR KLAIAADTRG FRANKHRTYV NELKLKRNDY IFLIYTILLT SGGLYLSYKG FGGTVPV
|
| |