Gene Mbar_A3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3551 
Symbol 
ID3625961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4558139 
End bp4559002 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content41% 
IMG OID637702383 
Productcobalt ABC transporter, permease protein 
Protein accessionYP_307000 
Protein GI73670985 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0401892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.225242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGCC TTTTTCGTTA TGAACAAAAA GATAGCCTGC TCCACAGGCT TGACCCGAGA 
GTTAAACTGC TCTGGCTCTT TGGAATTTCG GTGCTAAGTG TTGTTTTCGG AACTCCTGAT
TTATTGGCAA TATTATTCAT ATCAACTTTA CCTTTCTGGT TTATATTAAA GCCCTCAAAA
AGCAGGATAA AAGCAATGCT TATTATCTTC GGGAGTGTCC TGTTAAGCTT TACAATATCA
CAGGCTTTTT TTTATTATTG GGCCAAAGAG CCGTTGTTTA CTCTTATTCC ATCTTCTTTC
CCACTGGTGG GACCTCTTAC AGGAGGGATC TATTTCTATG CAGACGGAGC TATCTATGGA
CTGTATCAAT CTTTCCGTGT TATGGCTTCT CTAAGTGCTG CTATGCTTGT TATTGCCACA
ACTCATCCCG GAATGCTCAT CGATGCATTT GTTCGTTTTT TCGAAATTCG GATCGCAGGG
AAACGTTATA GAATAGGCAT TCCATACGAA ATTGCATTTA TGGTATCCTC TGCAGTCAGC
TTTGCTCCTA CAATGCTCGA AGAAAGCAGC ATAATCCTCA ATGCAATGCA GGCAAGAGGA
CTTGAGCTGA AAGGTGATAT CCGTAGAAAA GCAAAAGCCC TGAAATATAT CCTTGTTCCT
CTCGTAGTTA ATATACTCAG GGCAGGAAGA AAGCTTGCCA TTGCTGCCGA CACCCGAGGC
TTTCGAGCAA ACAAGCACAG GACCTACGTA AACGAACTCA AATTAAAAAG GAATGATTAC
ATCTTTCTGA TATATACAAT CCTTTTAACG TCAGGTGGGC TTTATCTAAG CTACAAGGGT
TTCGGGGGCA CAGTACCTGT TTGA
 
Protein sequence
MKSLFRYEQK DSLLHRLDPR VKLLWLFGIS VLSVVFGTPD LLAILFISTL PFWFILKPSK 
SRIKAMLIIF GSVLLSFTIS QAFFYYWAKE PLFTLIPSSF PLVGPLTGGI YFYADGAIYG
LYQSFRVMAS LSAAMLVIAT THPGMLIDAF VRFFEIRIAG KRYRIGIPYE IAFMVSSAVS
FAPTMLEESS IILNAMQARG LELKGDIRRK AKALKYILVP LVVNILRAGR KLAIAADTRG
FRANKHRTYV NELKLKRNDY IFLIYTILLT SGGLYLSYKG FGGTVPV