| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3533 |
|---|
| Symbol | |
|---|
| ID | 3627555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4531797 |
|---|
| End bp | 4532813 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637702359 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306982 |
|---|
| Protein GI | 73670967 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.674186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.782695 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGAA GCAAGGTAAG AAATCTTCTC CTTCTGAAGC AAATTCATAG TGCAGTAACC
CAGATCAAAA AAGGCAAGCT GGATAAAGCT CTTGAAACCT TAAACAAAGC TGAAGACTCG
GCAAGAAAAG CGAAAGCCAC TGACGCAGTA TATTATATTC TTTTTATGCG TGGGGGCATC
TATTATACTG AGGCAAAATA TGATGAAGCT CTCGAAACCT ACGAAAAGGC GATTGATGCA
GGTTCAGAAC TCCTTAAAGC TAATCCTGAA AATCTCGACT ACCAGCACTA TATGGGCACA
ACCCTGAGCA ATACCGGTAA CCTGCTAAAA AGTAAAGGTG AAAAGCCACA GGCTGTCGAG
TATTATACTC GGGCTCGGGA GATATATACA ATTCTCCTGG AGAAAGAACC TGAAAACGTC
GTTTTCCGAT CTGCTGCCGG CGAGAACCTG AACAATTATG CAGCTCTCCT TATGGATATG
GGTTCTTTTG AAGAAGCATG CGAAATTCTC AGTCAGGTGA TTGAGCTTTA TGAAAAGCTG
CTTGAAGAAA AGCCCGACAA CCCTGGCTAT CAGGCCGAAC TCGCAGTTGC GCTCAGCCGG
CTTGGAAACT GCCTTATTCA GCAGGGGCCG GAAAAATGCG ATACTGCAAA ACAGAGCCTT
GAAAAAGCTC TGGCCATACA GGAAAACATT CTCTCTCAGC AGCCTGAAGA TAAGAATATT
CAAGAAGCCA TCGCTTTAAC CCGGGAAAGA CTTGAAAAAC TGGAAACTCT GGAAGAGCAG
GAAAAACCAG AAACCCTGGA AAAACTGGAA AATCAGGAAA ACTTGGAGAA TCCAGAAAAA
TTGGAAGAAC AGGAAACCTT GAAGCACCCT GAAAACCTGG AGAATTTGGA AAGCCTGGAA
GAACAGGAAA AGCCAGAAAC TCTGGAAAAC CTGGAGAATC CAGAAAAGCC GGAAAAGCCG
GAAAAGCCAG AAACTTTGGA AAAGCTGGAG AATTCAGACA AGTCGGAAAA TCCTTAA
|
|---|
| Protein sequence | MSRSKVRNLL LLKQIHSAVT QIKKGKLDKA LETLNKAEDS ARKAKATDAV YYILFMRGGI
YYTEAKYDEA LETYEKAIDA GSELLKANPE NLDYQHYMGT TLSNTGNLLK SKGEKPQAVE
YYTRAREIYT ILLEKEPENV VFRSAAGENL NNYAALLMDM GSFEEACEIL SQVIELYEKL
LEEKPDNPGY QAELAVALSR LGNCLIQQGP EKCDTAKQSL EKALAIQENI LSQQPEDKNI
QEAIALTRER LEKLETLEEQ EKPETLEKLE NQENLENPEK LEEQETLKHP ENLENLESLE
EQEKPETLEN LENPEKPEKP EKPETLEKLE NSDKSENP
|
|---|
| |