| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3519 |
|---|
| Symbol | |
|---|
| ID | 3625407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4513420 |
|---|
| End bp | 4514163 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637702346 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306969 |
|---|
| Protein GI | 73670954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000834701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGCAGA CATTCCAGAA TGTTATTATC AACCGACAAG AGATAAACTC AATTGAGTTT
GAAAATGAAA GCGTTGAGAT TTCTCTGTCT CCCGGCGGAG AAGAAACCTT TGAGATCCTG
ATTACAAACC ATGGGTCTCC TACGCATATT CACTTTTCAG TAAGTGACGA ACTGAAAGGT
CAGATCATTT TTCTGAGGGA CAATCCATAT GTGCTTCAGA AAGAATATGT CTCTGTAGTT
GCAAGAATCC CGCAAGAAGG CAGAGTGCTT ACCAAAGGGC AGATCTATAT TACAGCGGGT
TATGGCTCAA GAAAGAAAGG TTTTCCAGTC CAGCTTGGAA AAATCGATCC TAAGCCGCAA
GAACACTCCG AAGACGAGTC TCGTGCAGGA AATCAGGAAG AAAAATTGAG TTCTCAAAGA
TCCTCAACTA CACTACCTAT AAAACTCTCT CACCCAAAAT CAATAAATGG GCTTGACGAG
TTTTCATCTT TTATCCACAG AAGCTTTACA GGAAGCTTTT CAGCTACAGA AAGAAAGATT
CCAAAAAATG TAAGTGAAAA CGAAAAACTT CCTTTTCACA TCGCTTTTGG AGGTTTTTTA
TTACTTGTAT GTTTATTCTT CCTCTACTTT ATACTGCCAT CGAGTCTGCA GTTTAAAGTC
AGCTTTGCCC AGTCGGTTTT GTTTTCAATA CTTTTTGTGA CCTGTATAAT ATATATTCTG
CTAAAAATTG CAGAAGAGAG CTAA
|
|---|
| Protein sequence | MQQTFQNVII NRQEINSIEF ENESVEISLS PGGEETFEIL ITNHGSPTHI HFSVSDELKG
QIIFLRDNPY VLQKEYVSVV ARIPQEGRVL TKGQIYITAG YGSRKKGFPV QLGKIDPKPQ
EHSEDESRAG NQEEKLSSQR SSTTLPIKLS HPKSINGLDE FSSFIHRSFT GSFSATERKI
PKNVSENEKL PFHIAFGGFL LLVCLFFLYF ILPSSLQFKV SFAQSVLFSI LFVTCIIYIL
LKIAEES
|
|---|
| |