| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3508 |
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| Symbol | |
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| ID | 3624906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4498153 |
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| End bp | 4500342 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637702335 |
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| Product | ski2-like helicase |
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| Protein accession | YP_306959 |
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| Protein GI | 73670944 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.197475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.39746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAG AAAGTCTCGA TCTGCCCGAT GAAGTAAAGC AGTTTTATCT CAATTCCGGA
ATTATGGAAC TTTATCCTCC TCAGGCCGAA GCCGTGGAAA AAGGTCTGCT TGAAGGAAGA
AACCTGCTTG CTGCAATCCC TACAGCTTCA GGGAAGACTC TCCTTGCCGA GCTTGCAATG
TTGAAATCCA TCCTTGCAGG AGGAAAGGCG CTCTATATCG TGCCTCTCAG AGCTCTTGCT
TCCGAGAAAT TCAGGCGGTT TAGGGAGTTT TCGGAACTTG GAATAAGGGT TGGGATCTCT
ACAGGGGACT ATGACCTGCG GGACGAGGGA CTCGGAGTAA ACGACATTAT TGTTGCAACC
TCCGAGAAAA CCGATTCCCT TCTCAGAAAC GAGACCGTCT GGATGCAGGA AATTTCAGTT
GTTGTGGCAG ACGAGGTTCA TCTCATAGAC TCACCGGATA GGGGCCCTAC GCTTGAGGTT
ACCCTTGCAA AGCTTCGGAA AATGAATCCT TCCTGTCAGA TCCTTGCATT ATCTGCAACT
GTCGGGAATG CCGACGAACT AGCAGTCTGG CTGGAAGCCG AGCTTGTAGT AAGTGAATGG
AGGCCTACTG AGCTTCTTGA AGGGGTATTC TTTAATGGGA CTTTCTATTG CAAAGATAGG
GAAAAAACTG TTGAGCAGTC CACAAAAGAC GAAGCCGTGA ACCTTGCGCT GGATACCCTC
AAAAAAGATG GGCAGTGTCT GGTTTTTGAA AGCAGCAGAA AAAACTGCAT GGCTTTTGCA
AAAAAGGCAG CTTCAACTGT TAAAAAGACT CTGTCAGCAG AAGATAGGAA TGCACTTGCA
GGAATTGCAG ACGAGATCCT TGAAAACAGT GAAACCGATA CTTCAACGAA CCTTGCAGTC
TGTATTCGTT CAGGAACAGC TTTTCATCAT GCAGGCCTCA CCACGCCTTT AAGAGAACTT
GTGGAGGACG GTTTCAGGGC TGGGAGGATA AAGTTGATTT CCAGCACTCC TACTCTCGCA
GCCGGGCTTA ACCTGCCTGC GCGGCGTGTG ATTATCCGAA ATTATCGGCG CTATTCTTCT
GAAGACGGAA TGCAGCCTAT TCCTGTACTC GAGTACAAAC AGATGGCAGG CAGGGCAGGC
AGGCCGAGGC TTGACCCGTA CGGAGAAGCC GTGCTTGTTG CAAAATCATA TAAGGAGTTT
GTTTTCCTTT TTGAAAACTA TATCGAAGCC AACGCCGAAG ATATCTGGTC CAAGCTCGGA
ACCGAAAATG CTCTCAGGAC CCATGTGCTC TCTACGATCT CTAACGGTTT TGCGCGGACA
TATGATGAAC TCATGGATTT TCTGGAGGCA ACATTTTTTG CTTTCCAGTA CTCGAACTTC
GGGCTTTCTA CGGTTGTGAA CGAATGCCTT AACTTTTTGC GTCAGGAAGG GATGCTTGAG
AAAGACGATG CCCTCATCCC TACAAGCTTC GGCAAACTTG TCTCAAGGCT CTATATCGAC
CCCCTGTCAG CTGCCAGGAT TGCAAAGGGC CTGAAAGGGG CAAAGAGCCT GAGTGAGCTT
ACCCTGCTGC ATCTGGTGTG CAGCACACCT GACATGCGCC TGCTTTACAT GCGGAGCCAT
GATTATCAGG ATATCAACGA TTATGTAATG GCTCATGCGA GTGAATTTGT AAAGGTGCCC
AGTCCCTTCG ATACTACGGA ATATGAATGG TTCCTTGGGG AAGTCAAGAC TTCCCTCCTT
CTGCTTGACT GGATCCATGA AAAATCTGAA AACGAGATTT GCTTAAAGTT CGGCACTGGG
GAAGGTGACA TTCATTCAAT TGCGGATATT GCGGAATGGA TAATGCACGT CACCTCTCAA
CTTGCCGGGC TCCTTGACCT CAAAGGTGCA AGAGAAGCCG CAGAACTTGA AAAGAGGATA
CATTACGGAG CAGCCCCTGA ACTTATAGAT CTGCTCAATA TCAGAGGTAT AGGGCGCGTG
AGAGCAAGGA AACTCTATGA GGCAGGCTTC AAATCCTCTG CAGAGCTTGC AGAAGTTGAT
CCTGAAAAAG TTGCTGCTCT TCTTGGGCCG AAAATTGCAG ACCGGATTTT TAAGCAGATC
AGGGGTAGAG GGACATCTTC TGGAATTATT GCTTCTGAAC CTCCTGAGAA AAGTCCGTAT
TCTGGGCAAA AAACAATTAG TGATTATTGA
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| Protein sequence | MKIESLDLPD EVKQFYLNSG IMELYPPQAE AVEKGLLEGR NLLAAIPTAS GKTLLAELAM
LKSILAGGKA LYIVPLRALA SEKFRRFREF SELGIRVGIS TGDYDLRDEG LGVNDIIVAT
SEKTDSLLRN ETVWMQEISV VVADEVHLID SPDRGPTLEV TLAKLRKMNP SCQILALSAT
VGNADELAVW LEAELVVSEW RPTELLEGVF FNGTFYCKDR EKTVEQSTKD EAVNLALDTL
KKDGQCLVFE SSRKNCMAFA KKAASTVKKT LSAEDRNALA GIADEILENS ETDTSTNLAV
CIRSGTAFHH AGLTTPLREL VEDGFRAGRI KLISSTPTLA AGLNLPARRV IIRNYRRYSS
EDGMQPIPVL EYKQMAGRAG RPRLDPYGEA VLVAKSYKEF VFLFENYIEA NAEDIWSKLG
TENALRTHVL STISNGFART YDELMDFLEA TFFAFQYSNF GLSTVVNECL NFLRQEGMLE
KDDALIPTSF GKLVSRLYID PLSAARIAKG LKGAKSLSEL TLLHLVCSTP DMRLLYMRSH
DYQDINDYVM AHASEFVKVP SPFDTTEYEW FLGEVKTSLL LLDWIHEKSE NEICLKFGTG
EGDIHSIADI AEWIMHVTSQ LAGLLDLKGA REAAELEKRI HYGAAPELID LLNIRGIGRV
RARKLYEAGF KSSAELAEVD PEKVAALLGP KIADRIFKQI RGRGTSSGII ASEPPEKSPY
SGQKTISDY
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