| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3503 |
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| Symbol | |
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| ID | 3624901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4492772 |
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| End bp | 4494070 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637702330 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_306954 |
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| Protein GI | 73670939 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.385411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.814215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACAGA CCAAGATTAT CCTTGACGAG AATGAAATGC CTAAACAGTG GTATAACGTC
CTTTCGGACT TATCTTCTCC TATCGAGCCG CCTCTTGATC CAAGAACCCG GGAGCCTATA
AGCCCTGAAG CCCTTGAACC TATTTTTCCA AAAGGTCTTA TCAAGCAGGA AATGAGCAGT
GAAAGGTTTA TTGATATCCC TGAAGAGATA CTTGAAATTT ACAGACTCTG GAGACCCAGT
CCTCTTTACA GGGCTCACAG GCTGGAAAAA CTTCTCAAAA CCCCTGCAAA GATATACTAT
AAAAATGAAG GGGTAAGCCC CGCAGGCAGC CATAAGACAA ATACCTCAAT TGCCCAGGCC
TACTATAATA TGAAAGAAGG AACCGAGAGG ATCACAACCG AAACAGGGGC AGGGCAGTGG
GGAAGTGCAT TGGCTCTTGC CTGCAATTAT TTTGATCTCG AATGTAAAGT CTATATGGTC
CGTTCCAGTT TTTACCAGAA ACCTTACCGG AAATCCATGA TAACAATCTG GGGAGGAAAT
GTTGTGCCCT CGCCAAGTGA AGATACCGAA TTCGGGAGAA AGATTCTGAA GGAGCAGCCG
GAAACACCGG GAAGCCTGGG AATAGCAATC AGTGAAGCCG TAGAGGATGC AATCGCACAC
GATAGCACTA AATATTCCCT TGGAAGCGTG CTCAACCATG TTATGCTCCA CCAGACGATA
ATCGGGGCCG AATGCAAGAA GCAGCTTGAA CAAGTTGAAA CCTATCCTGA TATAGTTATA
GGCTGCTGCG GAGGAGGAAG CAACCTCGCG GGAATATCTC TTGAGTTTAT TAAAGACAAG
ATTGAAGGAA AGAGGAATCC AAGAGTAATT GCAGTCGAGC CCTCAGCCTG CCCGTCCCTG
ACCAAAGGAG AATACAGGTA CGACTTCGGA GACACTGCGG AAATGACCCC ACTTCTTAAA
ATGTATACCC TGGGACACAA ACATGTGCCT CCTGCCATCC ACGCAGGCGG ACTCCGTTAC
CATGGTGACT CCCCAATCAT AAGTAAACTC TGTGATGAAG GGTTTATCGA AGCCGTTTCA
TATGATCAGT ATCCTGTATT TGATGCCGCT GTGCAGTTCG CACGGACTGA AGGCATAGTC
CCTGCTCCGG AATCCGCGCA TGCTATCCGC TGTGCAATCG ACGAAGCTAT CAAATGCAAG
CAAACCGGAG AAGAAAAAAC AATTCTCTTC AACCTGAGTG GACACGGACA TTTCGACATG
AGTTCATATG ACAAATATTT CAACAAAGAA CTTGCCTGA
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| Protein sequence | MEQTKIILDE NEMPKQWYNV LSDLSSPIEP PLDPRTREPI SPEALEPIFP KGLIKQEMSS
ERFIDIPEEI LEIYRLWRPS PLYRAHRLEK LLKTPAKIYY KNEGVSPAGS HKTNTSIAQA
YYNMKEGTER ITTETGAGQW GSALALACNY FDLECKVYMV RSSFYQKPYR KSMITIWGGN
VVPSPSEDTE FGRKILKEQP ETPGSLGIAI SEAVEDAIAH DSTKYSLGSV LNHVMLHQTI
IGAECKKQLE QVETYPDIVI GCCGGGSNLA GISLEFIKDK IEGKRNPRVI AVEPSACPSL
TKGEYRYDFG DTAEMTPLLK MYTLGHKHVP PAIHAGGLRY HGDSPIISKL CDEGFIEAVS
YDQYPVFDAA VQFARTEGIV PAPESAHAIR CAIDEAIKCK QTGEEKTILF NLSGHGHFDM
SSYDKYFNKE LA
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