| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3501 |
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| Symbol | |
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| ID | 3624899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4490945 |
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| End bp | 4492291 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637702328 |
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| Product | hydroxymethylpyrimidine kinase |
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| Protein accession | YP_306952 |
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| Protein GI | 73670937 |
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| COG category | [H] Coenzyme transport and metabolism
[S] Function unknown |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG1992] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.604187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAA AAACCTTAAA AGTAAAAACC CCAATTGTTC TGACTATTGC AGGTTCGGAT
TCAGGGGGAG GAGCCGGAAT TGCTGCGGAC CTGAAGACTT TTGCCGCTCT TGGAGTACAT
GGAACCTGCG CTATTACATC GGTTACTGCA CAGAATACCA CTGGAGTGCT GAAAACCTTT
GACCTCACTC CTGAAGCTGT CGCCAGCCAG ATTGAAGCTG TCTGCACCGA TATGGAGGTC
GGGTGGGCAA AAAGTGGTAT GCTTGCCTCA TCGGAAATCG TAAGGGAAGT TGCAAAAGAA
ATCAGGAAAT ACGAGCTTTC CCTTGTGCTG GATCCTGTTA TAGCTGCTGA AGCAGGAGGA
AACCTGCTGC GAAAAGAAGC TATCTCTGTC CTTACCGAAG AACTGCTGCC CTTCTGCAAG
GTTACGACGC CCAATGCATC CGAAGCAGGT GAGCTCGCTG GCATGGCTGT CAAAACCCCT
GAGGACGCGA AAATCGCAGC CAGAAAAATT GCGGACCTGG GTGTCGAAGC TGTCATTGTT
ACAGGAGGAC ACCTGAATGC CACTGACTTG ATTTATGAAG CTGATTCTGA GACTTTTACC
CGTGTTCCGG GCACTTTTGT TAAAGGAGGA ACACACGGCA CGGGCTGCAC TTACTCTGCG
GCAGTGACTG CCTTCTTAGC CTCAGGAGAG AACCTGGAAG GAGCTGCAAG GAAAGCAAAG
AAATTCGTTG AACAAGCAAT CCTCAGGAGC AGGCCTGCAG GCAGGGGAGT AAGTCCTGTA
AACCAGCTTG GAGTGGTTCT GGAGCAAAAA GAGCGCTATC TGGTATTAAG AGAATTAAAA
GAAGCAGTTT CGATTCTTGA AGGCAGCCCT GATTTTTCAA AACTGATTCC CGAAGTAGGT
TGTAACATAG GAATGGCTAT TCTTGAAGCT GACAGCTACG AAGACGTTGC GGCCGTCGAA
GGCAGGATAG TAAGGCACAG GGGACGTGCG GTTCCTGTAG GTTGTGTGGA TTTTGGGGCC
AGCCGACATG TAGCAAGGAT TATTCTCGCG TCCCTTCGTT ATGATCCTGA AGTTAGGGCA
GCAATTAACG TAAAATACTC CAGGGAGGCA CTTGCAGCCT GCATAGATAT GAAACTTGAA
ATTTCCTCTT TTGACAGGGC TGAAGAACCA GAAAACTCCA GTACTATGGA CTGGGGTACA
GTCGAAGCAA TCAAAAAGTA CGGAAGTGTG CCGAAAATCA TCTGTGATAA AGGAGGCCAG
GGAAAAGAAC CAATGATCCG CCTGCTCGGG AGATGTGCAA CTGAAGTGGC AAAGCTTGCT
GTGGAGCTTG CAGAAAAAAT ACAGTAA
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| Protein sequence | MTEKTLKVKT PIVLTIAGSD SGGGAGIAAD LKTFAALGVH GTCAITSVTA QNTTGVLKTF
DLTPEAVASQ IEAVCTDMEV GWAKSGMLAS SEIVREVAKE IRKYELSLVL DPVIAAEAGG
NLLRKEAISV LTEELLPFCK VTTPNASEAG ELAGMAVKTP EDAKIAARKI ADLGVEAVIV
TGGHLNATDL IYEADSETFT RVPGTFVKGG THGTGCTYSA AVTAFLASGE NLEGAARKAK
KFVEQAILRS RPAGRGVSPV NQLGVVLEQK ERYLVLRELK EAVSILEGSP DFSKLIPEVG
CNIGMAILEA DSYEDVAAVE GRIVRHRGRA VPVGCVDFGA SRHVARIILA SLRYDPEVRA
AINVKYSREA LAACIDMKLE ISSFDRAEEP ENSSTMDWGT VEAIKKYGSV PKIICDKGGQ
GKEPMIRLLG RCATEVAKLA VELAEKIQ
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