| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3465 |
|---|
| Symbol | |
|---|
| ID | 3626438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4444788 |
|---|
| End bp | 4445165 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637702294 |
|---|
| Product | 30S ribosomal protein S8e |
|---|
| Protein accession | YP_306918 |
|---|
| Protein GI | 73670903 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2007] Ribosomal protein S8E |
|---|
| TIGRFAM ID | [TIGR00307] ribosomal protein S8.e |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0040135 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGGC AAGGTAGCTC CAGAAGAAAA GTGACCGGTG GGAAAGTTAT TAATGCTCGC
GGAAAGCGCA AGTTTGAAAT GGGCCGTGAG TCTGCAGAAA CCCGTATAAG TGAAATAAAG
AGGAAAAATG TTCACACTAT GGGAGGCAAC AGGAAGGTAA GACTTCTTCA GTGCGATGTT
GCAAACATAA CCAATCCCAA AGATGGGAAA ACCACCTCTG CTCCCATTGA AACAGTTCTC
GACAACATTG CAAACAAGCA CTATATCAGG CGTAACATTC TGACAAAAGG CTCAGTAATA
AGGACTCCTC TTGGAACTGC TAAAGTTACA AGCAGACCAG GGCAAGACGG AGTTGTAAAT
GCTGTATTAA TTGAATAA
|
|---|
| Protein sequence | MRWQGSSRRK VTGGKVINAR GKRKFEMGRE SAETRISEIK RKNVHTMGGN RKVRLLQCDV
ANITNPKDGK TTSAPIETVL DNIANKHYIR RNILTKGSVI RTPLGTAKVT SRPGQDGVVN
AVLIE
|
|---|
| |