Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3461 |
Symbol | |
ID | 3626434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4436688 |
End bp | 4441691 |
Gene Length | 5004 bp |
Protein Length | 1667 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637702290 |
Product | hypothetical protein |
Protein accession | YP_306914 |
Protein GI | 73670899 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0200466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGGAA AGAATTGTAA TAGAGAACTT AGGAGGCGAA CCTTAAATAA AGTTTTGGGG ATGGCGGTAC TTGCTTTTTT AATGTTAGTG AGCATAGCAG GCGCCGCGCC ATTTGCATAC ATTACAAATG CAGAGAGTAA CAGTGTCTCT GTAATTGACA CAGCCACAAA CAAAGTTACA GCTGCAATAC CTGTAGGGTC CAATCCTATG GGAGTTGTAA TTAATCCGAA CGGGACAAGG GTTTACGTAG GAAATGTCCT TAGTAATGAT GTATCTGTAA TCGACACGGC AACAAATAAT GTTATAACCA CAGTGAGTGT AGGAAATTCA CCCCAGGGGG TTGCAGTTAG CCCTAACGGA AATAAAGTAT ATGTAACAAA CCGATATAGC AACAATGTTT CTGTGATTGA TACCACCGCA AATACTGTTG TAAGCACAGT GAATACAGGA AAGTACCCTG AAGGAGTAGC GGTAAGTCCA GATGGAAAAA AAATATATGT AACAAATTAC GCGGACAATA CTGTCTCTAT AATTGACACT GCCACGAAAG CTATTATAAC CACGGTATCC GTAGGAAAAG GTCCTAAAGA AATTGTGGTC ACACCAGACG GGAACAGGGT GTACGTGGTA AACTACGATG GCAGGAGTAT CTCCATAATT GACACGGCAA CAAACAGTGT TACAAACACG GTGAAGCTTG GGGGAACTCC CTTTGGAGTC GCAGTCAATC CAGATGGAAA AAAGGTGTAT GTGACCAATA ACGCTGAACA TTTCAGTACT GTATCGGTAA TTGACACGGC AACAAACAAA ATTATATCCA CGATACCTGT AGGCCCCGAT CCTGTGGGAA TTTCAGTCAC ACCGGATGGA AAAAAAGTAT ATGTAGCAAT CAATTTCTAT AACACTGTCT CTGTAATTGA CACTGCTACT AACGCTGTTA CAGCCACGAT GCTTGTAGGA AACAGCCCTT ACGCTTCAGG CCAGTTTATA GGTTCTATCC CAATACAACC AGTTTATCCC TTAGCGAACT TCAGCAGCAA TATCACATCA GATTATGTTT TCCTTTCTGT ACCTGTGCAG TTTACAGATC TCTCAAAAAA TGCAACTAAA TGGGTCTGGG ACTTTGGAGA CGGGTCTGGT TCAACAAAGC AGAATCCCAC GCATACCTAT TCTACAACAG GAATTTATAC TGTTAGCCTG AAGGTAAACA ATTCAAACGG TACAGATTCA AAACTTGCTA CAGTAAATGT TGTACCAAAA GGTTCTCCTG CACCTTCATA TGCATTTATT ACAAATCTCA ACAGCAACAC TGTTTCTGTA ATTAACACAG GAAACAATAC TCTTACAGCC ACAGTGCCCG TAGGGACCGA GCCTTTTGGA GCTGCAGTTA ACCCGGATGG AACAAAAGTA TATGTGACAA ATACCAAGTA TGGCGAGAGG GGTACGGTTT CTGTAATTGA CACAGCAACA AACAAGGTTA CAGCTATTGT GGATGTAGGC CATAAATATA GTCCCTGTGG AATTGCAGTC ACACCGGACG GAAAAAAACT ATACGTGGCG GATCGTGATA TCAAAGCTGT CTCTATAATT GATACATCTA CAAACACTGT TACAGCCACC GTGCCTGTAG GAGTTAATCC ACTAGGGGTT GCAATCACAA CGGATGGAAA AAAAGTATAT ATAACGAACC GTTATAGCAA CACTGTTTCT GTAATTGATA CCAGTACAAA TAATGTTATA TCGACTGTGG AAGTTGGATC TGGCCCCTGT GGAGTTACAA TTAACCCGAT GGGAACAGAA CTATATGTGA CGAATTGTGA AAGCAATACT ATTTCTATAA TTGAAATAAG TTCAAATACT GTTACATCCA CAGTACCTGT AGGGGAATGG CCTATGGGGA TTGCAGTAAC TCCTGATGGA AAAAAGGTAT ATGTGGTAAA TGAAGGCAGC AACAACGTAT CGGTAATCGA TACCGCAACA AAAACTGTTA TAGCGACTGT GAAAGTCAGA AAAAGCCCTT ACGGAATTGC AATCACTCCT GATGGAAAAA AGGTATATGT AGCAAACTCC GGTAATAGCG ATAATCTCGG AAACACTGCC TCTATAATTG ACACTGCTAC AGACAGAGTT ACAGCCACAG TAAACACAGG TTTCCGTCCT ATTGCTTTCG GTCAATTTAT TGGTCCTCTT CCAGCACAAC CAGTTTATCC TGTTGCAAAC TTCAGCAGCA ATGTCACATC CGGTTACGCT CCTCTTTCAG TCAAGTTTAC GGATTTCTCG ATGAATGCGG ATGGTTGGAG CTGGGACTTT GGAGACAAAT CCACTTCGAC ACAGCAGAAT CCAGCACACA CTTACTCCAG GGCAGGGAAT TACAATGTAA CGCTTACAGT AAACAATAAA AACGGTACTG ATTCGAAAAT TGCCACAGTA ACTGTTCTGG CACATCCAGG ATTTTCTGCC TCCCCAACTT CAGGAAAATC GGCACTTGGC GTTAGTTTTA CTGACCAGAG CACAGGATCG CCAGCCTCAT GGAAATGGAC TTTTGGAGAT GGAACTTATT CAACGGAAAA GAACCCTGTG CATACATATC GAAAGTCAGG AAAATATTCA GTTACGTTGA CATTGAACGA AACTGGAAAC AAGACTGCAG TAACAAAATC CAGCTATATA ACTGTTTCAA ACGGGTATGA AGCTCCCATT GCTGCTTTCT CTGCATCTCA GGTTTCAGGA AAAGCACCTC TTACTGTTAG TTTTACTGAT CAGAGTACCG GATCGCCAAC CTCAAGGAAG TGGACTTTTG GAGACGGTAC ATATTCAACC GGGAAGAACC CTGTACATAC ATACAGCAAA GCAGGATTAT ATTCTGTTAC ATTAGCAGTA AGTAATGCAG ATGGTAGTAA TACATTAACA AAAACCGGCT ATGTTGCTGT TTCAAACGTT TTAAATCCAC CTGTCCCCAG CTTTTCTGCA TCCCTTACTT CAGGAAAAGC ACCTTTAGCG GTTGATTTTT CTGGCAAGGG CACAGGATCA CCAACTTCAT GGAAATGGTC TTTCGGAGAT GGGAATACTT CAACAGAAAA GAATCCTGTG CACACATTCA ACAAATCAGG ACTTTATTCT GTAACATTGA GAGCAAGTAA TGAAAAAGGC AGTAATGCCT TGACAAAAAC CGGCTGTATT GCTGTATCAA GCACATTAAA TATTCCTGTT TCCAAATTCA CTGCGTCCCC TACTTCAGGA AAAGTGCCTT TTACAGTTAG TTTTACTGAC CAGAGCACAG GATCGCCAAC TAAATGGAAA TGGATTTTTG GAGATGGAAC TAATTCAACC GAAAAAAATC CGGTACATAC ATACAATGAA TCAGGGCTTT ACCCTGTTAA ATTGACAGTG AGTAATGCAA ATGGTAGTAA TGCCTTGACA AAAACCGGTT ATATTGCTGT CGTCTCAAAC GTTTTAAACA ACACAACTGT TTCCAAATTT TCAGCTTCCC CAACTTCAGG AAAAACACCT CTTACTGTTA GTTTTACTGA CCAGAGCATA GGGTCACCAG CTGCATGGAA ATGGACTTTT GGAGATGGAA CTAATTCAAC CGAAAAGAAT CCGGTACACA CATACAATAA ATCAGGAAAT TATACTGTTG CTTTGACGAC GACTAATGAG GAAGGCAGTG ATAAGGTGCA AAAATCAAAC TGTATAAATG TAACTCCTGT AAACGGTAGT GTGGTATCGA GCCCAGGGTA TATTGTTCCT GTCACCGCCT TTTCAGCAAC TCCAACTGTA GGAAGTATGC CTCTTAAGGT TAGTTTTACT GACCAGAGCA CAGGCTTTCC AACTTCATGG ACATGGAATT TTGGGGATCG GAACACTTCA AAAGAGAAAA ATCCTGTACA CACATACAAT AAATCCGGTA GATACGCAGT TACATTGACA ACAAGTAACG CGAACGGCAG TAATACTTTG ACAAAATCCA GCTATATTTA TGTATCAAAC GTTTTATCTC CTCCTGTCAC TGGTTACTTT GCATCCCCTG CTTCAGGAAA TATGCCTCTT AAGGTAATTT TTACTGACCA GAGCACAGGG TCACCAATGG CATGGAGATG GACTTTTGGA GATGGGAACA CTTCAAAAGA GAAAAATCCG GTACATAAAT ACAATAAGTC CGGACGATAT ACTGTTACAT TGACAGCAAG TAATGCAAAT GGTAGTAATA CCTTGACAAA ATCAGGTCAT GTTGTTGTGT CAAGCGTTTT AGCTGCTCCT GTTGCCAGCT TCTCTGCGTC TCCTACTTTA GGAAAAGCCC CACTTACTGT TAGTTTTACG GACCAGAGTA CAGGGTCGCC AACTAAATGG AAATGGGCTT TCGGAGACGG GAATACTTCA ACAGAAAAGA ATCCTGTGCA TACATATAAT AAATCAGGGC TATATTCTGT TACATTGACA GCAAGTAATG CAAACGGCAG TAATACCTTG ACAAAAACCG ACTACATTGC TGTCTCAGGT GTTTTAACTG CTCCTGTTGC CGGTTTCTCT GCGTCCCCAC TTTCAGGAAA AGTGCCTTTT ACGGTTAGTT TTACTGATCA GAGTACCGGA TCACCAACCT CATGGAGATG GATTTTTGGA GATAGGAACA CTTCTACAGA GATGAATCCT GTGCACACAT ACAATAAATC AGGACTATAT TCTGTTACAT TGACAGCAAG TAATGCAAAC GGCAGTAATG CACTGATAAA AACCGGCTAT ATTGCGGTTT CAAACTCCCT TGACGCTGCT TTTTCTGCAT CTCCAACTTC AGGATCTGTA CCGCTTAATG TCAGTTTTAC TGACAATAGC ACCGGATCAC CAACTTCATG GAGATGGGCC TTTGGAGATG GAAATACTTC AACCGAAAAG AATCCTGTAC ATATGTACAA CAAAACAGGA CGATATACTG TTAGTTTAAC CGTAGATAAT TTAGAAAGCA GCAGTACTGA AACCAGAACC AGATACATTA TAGTTAGTAA TTGA
|
Protein sequence | MKGKNCNREL RRRTLNKVLG MAVLAFLMLV SIAGAAPFAY ITNAESNSVS VIDTATNKVT AAIPVGSNPM GVVINPNGTR VYVGNVLSND VSVIDTATNN VITTVSVGNS PQGVAVSPNG NKVYVTNRYS NNVSVIDTTA NTVVSTVNTG KYPEGVAVSP DGKKIYVTNY ADNTVSIIDT ATKAIITTVS VGKGPKEIVV TPDGNRVYVV NYDGRSISII DTATNSVTNT VKLGGTPFGV AVNPDGKKVY VTNNAEHFST VSVIDTATNK IISTIPVGPD PVGISVTPDG KKVYVAINFY NTVSVIDTAT NAVTATMLVG NSPYASGQFI GSIPIQPVYP LANFSSNITS DYVFLSVPVQ FTDLSKNATK WVWDFGDGSG STKQNPTHTY STTGIYTVSL KVNNSNGTDS KLATVNVVPK GSPAPSYAFI TNLNSNTVSV INTGNNTLTA TVPVGTEPFG AAVNPDGTKV YVTNTKYGER GTVSVIDTAT NKVTAIVDVG HKYSPCGIAV TPDGKKLYVA DRDIKAVSII DTSTNTVTAT VPVGVNPLGV AITTDGKKVY ITNRYSNTVS VIDTSTNNVI STVEVGSGPC GVTINPMGTE LYVTNCESNT ISIIEISSNT VTSTVPVGEW PMGIAVTPDG KKVYVVNEGS NNVSVIDTAT KTVIATVKVR KSPYGIAITP DGKKVYVANS GNSDNLGNTA SIIDTATDRV TATVNTGFRP IAFGQFIGPL PAQPVYPVAN FSSNVTSGYA PLSVKFTDFS MNADGWSWDF GDKSTSTQQN PAHTYSRAGN YNVTLTVNNK NGTDSKIATV TVLAHPGFSA SPTSGKSALG VSFTDQSTGS PASWKWTFGD GTYSTEKNPV HTYRKSGKYS VTLTLNETGN KTAVTKSSYI TVSNGYEAPI AAFSASQVSG KAPLTVSFTD QSTGSPTSRK WTFGDGTYST GKNPVHTYSK AGLYSVTLAV SNADGSNTLT KTGYVAVSNV LNPPVPSFSA SLTSGKAPLA VDFSGKGTGS PTSWKWSFGD GNTSTEKNPV HTFNKSGLYS VTLRASNEKG SNALTKTGCI AVSSTLNIPV SKFTASPTSG KVPFTVSFTD QSTGSPTKWK WIFGDGTNST EKNPVHTYNE SGLYPVKLTV SNANGSNALT KTGYIAVVSN VLNNTTVSKF SASPTSGKTP LTVSFTDQSI GSPAAWKWTF GDGTNSTEKN PVHTYNKSGN YTVALTTTNE EGSDKVQKSN CINVTPVNGS VVSSPGYIVP VTAFSATPTV GSMPLKVSFT DQSTGFPTSW TWNFGDRNTS KEKNPVHTYN KSGRYAVTLT TSNANGSNTL TKSSYIYVSN VLSPPVTGYF ASPASGNMPL KVIFTDQSTG SPMAWRWTFG DGNTSKEKNP VHKYNKSGRY TVTLTASNAN GSNTLTKSGH VVVSSVLAAP VASFSASPTL GKAPLTVSFT DQSTGSPTKW KWAFGDGNTS TEKNPVHTYN KSGLYSVTLT ASNANGSNTL TKTDYIAVSG VLTAPVAGFS ASPLSGKVPF TVSFTDQSTG SPTSWRWIFG DRNTSTEMNP VHTYNKSGLY SVTLTASNAN GSNALIKTGY IAVSNSLDAA FSASPTSGSV PLNVSFTDNS TGSPTSWRWA FGDGNTSTEK NPVHMYNKTG RYTVSLTVDN LESSSTETRT RYIIVSN
|
| |