| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3455 |
|---|
| Symbol | |
|---|
| ID | 3626428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4431343 |
|---|
| End bp | 4431885 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637702284 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306908 |
|---|
| Protein GI | 73670893 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1267] Phosphatidylglycerophosphatase A and related proteins |
|---|
| TIGRFAM ID | [TIGR03161] alpha-ribazole phosphatase CobZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.158855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAT CCGATATTGA GGAAAGAGAC CTGAAAAAAG GGCAGCCTGA GAAAATAGAA
GAAAAAGCTA CAGTCAACAT CCTCGATGTC CTTGCTGAAG AAGGCATCAG TGTTCAGGAC
CTTGCTGATA CAGCTTTGGA AATGTATGTT CCCCATCCAG GGCTTGAGAC CAGAGAGAAA
GCCGACGCTT TATTTAAAAG GGAACTTAAG TACGCACTTT CAGATCCAAA CCTCTGCCTT
CTAATCTACT CCGGGATCTT GCTGGAGCGA GAAGGTAGGG CAGGAACCCT TCCGAACCTC
AGCAAAAGTT CTTATGAAAA GGACCTTACT TTTATAATTG CGGATGAAGT GCTCGGCACA
AGTATTGCAA CCTATATAAG CGGTTCCAAG GGAGCTTTTG AATTTGTCAG GTTTGACAAA
CAGAAGCCTG GAATCCTTGC AAAGCTCGGG CCTTTTATGG ATGACGTTAT CGGGGGCCTT
ATAGGAGGCG TGTCTTCCAA TATGTATTCA AGAGGTATGG CAGAATTTGT AGGAAAGGAC
TGA
|
|---|
| Protein sequence | MKLSDIEERD LKKGQPEKIE EKATVNILDV LAEEGISVQD LADTALEMYV PHPGLETREK
ADALFKRELK YALSDPNLCL LIYSGILLER EGRAGTLPNL SKSSYEKDLT FIIADEVLGT
SIATYISGSK GAFEFVRFDK QKPGILAKLG PFMDDVIGGL IGGVSSNMYS RGMAEFVGKD
|
|---|
| |