| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3452 |
|---|
| Symbol | hisS |
|---|
| ID | 3626425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4427143 |
|---|
| End bp | 4428372 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637702281 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_306905 |
|---|
| Protein GI | 73670890 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.192864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTTA ATAGACCAAG AGGGACCCGG GACTTTTTAC CTGCCGATAC TGCCCGGAGA
AGATACGTGG AAAGTGTTAT GCGAGATGTT GCCCGCAAAT GGGGCTACAG TGAAATCATT
ACGCCCACGT TTGAACATCT GGACCTTTTC ACCCTTAAAT CAGGGGAAGG GATCATAGGG
GAACTCTACA ATTTTACGGA CAAAGGCGGC AGGGAAATGA CCCTCAGGCC CGAGCTTACT
GCTCCTGTCA TGCGCCTGTA TATAAACGAA CTTCAGCCTT TCCCGAAGCC TTTAAAATTG
TTCTACTTCG AAAACTGTTT CCGCTATGAG CGTCCCCAGA AAGGCCGTTT CAGGGAGTTC
TGGCAGTTCG GGGTTGAACT TATAGGAAGC GGAAAACCTG ATTCCGATGC CGAGGTTATT
GCCCTTGCCG ATGCCATGTT AAAAGCCGCC GGAGTGAAGG GCGACATGAA GCTCGGAAAC
CTTGCGGTCA TACGTACGCT CTTGAGCGGG CTTGAACCCG AAATTGTGAG CAAGGTCATG
CGGCTTGTGG ATAAAAAAGA GTACGCCGGC CTTGAAGCCC TGCTTGAAGA AATAGGAGCC
GAAGAACAGC TCAAGTCCGA CCTTTTCCAC CTGATAAAAC TGGAAGGCAA GCGTATCCTC
CCAGAGGTAA TAAAAATCGT AGGAAATATC CCTGAGCTTG TAAGCTTTGA AAAAACCCTT
AAGCTTCTCG ACGCATACGG AGTCGATTAC TCTCTTGACT TCGGGATTGC ACGCGGGCTT
GATTACTATA CAGGCATGGT TTTTGAGGTC TATGCCGAGG GCCTCGGAGC TCAGAAACAG
GTCTGTGGTG GAGGTTCTTA CCAGCTTATC AAGCTTTTCG GAGGCGGAGA CGTGCCTTCA
ACCGGCTTCG GAATAGGTTT TGACCGGATT ATGGAAATCT GTCCTCTCAC CCCCCCTGCT
CCTAAAACCC TTATGCTGAT CTCGAAACCC GATCTTCACC TGAAAGCAAT AGGTTTTGCA
AATAAATTAA GGAAGTACGT GCCAGTCCAT GTAGATCTCA TGCAGCGTAA TTTCAAAGCC
CAGCTTTCCT ATGCAAATAC CATCAACGCC GATTACGTGG TTATAGTCGG GGAAAAAGAA
CTTGAAGTCG GAAAACTGAC TCTGAGAGAT ATGGTTTCAG GAGAACAGGA ACTTCTGACG
CTGGAAGAGA TTATTGAGAA AGTTTGTTAA
|
|---|
| Protein sequence | MTVNRPRGTR DFLPADTARR RYVESVMRDV ARKWGYSEII TPTFEHLDLF TLKSGEGIIG
ELYNFTDKGG REMTLRPELT APVMRLYINE LQPFPKPLKL FYFENCFRYE RPQKGRFREF
WQFGVELIGS GKPDSDAEVI ALADAMLKAA GVKGDMKLGN LAVIRTLLSG LEPEIVSKVM
RLVDKKEYAG LEALLEEIGA EEQLKSDLFH LIKLEGKRIL PEVIKIVGNI PELVSFEKTL
KLLDAYGVDY SLDFGIARGL DYYTGMVFEV YAEGLGAQKQ VCGGGSYQLI KLFGGGDVPS
TGFGIGFDRI MEICPLTPPA PKTLMLISKP DLHLKAIGFA NKLRKYVPVH VDLMQRNFKA
QLSYANTINA DYVVIVGEKE LEVGKLTLRD MVSGEQELLT LEEIIEKVC
|
|---|
| |