| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3446 |
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| Symbol | |
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| ID | 3624883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4415180 |
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| End bp | 4415863 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637702275 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_306899 |
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| Protein GI | 73670884 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000207745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0995359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAG AAAGCCCAAT AATCGAGCTT AAAAATCTTA CAAAAACCTA TCAAAACGGG
ATGGAATTCC GTGCTCTTGA TAATGCAAAT CTGAAAATAA AAAAGGGGGA ATTCGTTGCA
ATTGTCGGGC CATCAGGTTC AGGCAAAAGT ACACTTATGC ATTTAATAGG CCTGCTGGAT
ACTCCAAGCT CAGGTACTCT ACTGATAGAC AGAAATAATG TAACAAATAT GTCTGACAAA
GAACGTTCTG AGATAAGGAA CAGGATGCTT GGTTTTGTCT TCCAGTACCA TCATTTGCTC
CCTGATTTTA CAGCCCTGGA AAATGTAATG ATACCACTTT TAATTGCTGG AAAAAAGAGG
AAAGAAGCAA AGGAAACTGC CGAAAAACTC CTGAAAGAAG TCGGACTTGA AGATAGAATG
GATCACAAAC CCGGTGAACT TTCAGGAGGG CAGAATCAAC GAGTTGCAAT AGCAAGAGCG
TTAAGCTGTT CCCCTGCAAT TGTACTGGGG GACGAACCTA CAGGCAACCT TGATACAAAA
ACAGGTGACA TGATCTACGA GCTGCTGAGA CAGCTGAATA AGGAGTATAA TCAGACATTT
ATTGTAGTTA CTCATAACGA TGATATGGCT TTAAAAGCTG ATAGAATCAT CAGGCTTGTT
GATGGGAAAA TTACGGTTCA GTAA
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| Protein sequence | MTEESPIIEL KNLTKTYQNG MEFRALDNAN LKIKKGEFVA IVGPSGSGKS TLMHLIGLLD
TPSSGTLLID RNNVTNMSDK ERSEIRNRML GFVFQYHHLL PDFTALENVM IPLLIAGKKR
KEAKETAEKL LKEVGLEDRM DHKPGELSGG QNQRVAIARA LSCSPAIVLG DEPTGNLDTK
TGDMIYELLR QLNKEYNQTF IVVTHNDDMA LKADRIIRLV DGKITVQ
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