Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3434 |
Symbol | |
ID | 3624870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4402413 |
End bp | 4403042 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637702262 |
Product | heat shock protein GrpE |
Protein accession | YP_306887 |
Protein GI | 73670872 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.398988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0620931 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAT TCAATAAAGA TGGAAATAAG AATTCTAAAG AAGATACCAA GGCTGGGGCT GAAAATTCTG AAGCCCAAAA TTCTGGTTCT TCGGCGGAAG AGGTTAATAA AGCACGGGAA AACCCCGAAG AGGCTTCTGC CAGTTCGGAA GCTGAGAAAA GTCCTGAGGT CAAGTGCCAG GAGGAGAAAC AAGTTCTCAT GGAGAAGTAT TATCGACTTG CAGCCGACTT TGACAATTTC AAAAAACGGA CCGCCCGCCA GATGGAGGAA AACCGGAAAG CTGTACTTGA GCAGGTACTT CTTGACTTTG TTGAAGTAAC GGATAATTTC GATCGCGCCC TTAAATCTGC AAAAACCGCA GAAGACATGA GCTCAATCGT CAGCGGAATA GAACAGCTTT CAAGGCAGTT TTTTTCAATC CTCGAAAAAT ACGGGCTTGA GAAAATCGAA AGTGAAAAAG CCAGTGAATT TGACCCTCAC AGGCACGAGG CAGTTCACCA TATCGAGACC TCCGAAGTCC CGGACAATAC TATAGTAGAT GTTTACAAAA CCGGGTATGC TCTTAACTCT AAAGTTATCA GGCCTGCTAT GGTCTCAGTG GCCAGAAATC CTGATGAAGC CGAGAAATAA
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Protein sequence | MKIFNKDGNK NSKEDTKAGA ENSEAQNSGS SAEEVNKARE NPEEASASSE AEKSPEVKCQ EEKQVLMEKY YRLAADFDNF KKRTARQMEE NRKAVLEQVL LDFVEVTDNF DRALKSAKTA EDMSSIVSGI EQLSRQFFSI LEKYGLEKIE SEKASEFDPH RHEAVHHIET SEVPDNTIVD VYKTGYALNS KVIRPAMVSV ARNPDEAEK
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