Gene Mbar_A3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3434 
Symbol 
ID3624870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4402413 
End bp4403042 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content44% 
IMG OID637702262 
Productheat shock protein GrpE 
Protein accessionYP_306887 
Protein GI73670872 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.398988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0620931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT TCAATAAAGA TGGAAATAAG AATTCTAAAG AAGATACCAA GGCTGGGGCT 
GAAAATTCTG AAGCCCAAAA TTCTGGTTCT TCGGCGGAAG AGGTTAATAA AGCACGGGAA
AACCCCGAAG AGGCTTCTGC CAGTTCGGAA GCTGAGAAAA GTCCTGAGGT CAAGTGCCAG
GAGGAGAAAC AAGTTCTCAT GGAGAAGTAT TATCGACTTG CAGCCGACTT TGACAATTTC
AAAAAACGGA CCGCCCGCCA GATGGAGGAA AACCGGAAAG CTGTACTTGA GCAGGTACTT
CTTGACTTTG TTGAAGTAAC GGATAATTTC GATCGCGCCC TTAAATCTGC AAAAACCGCA
GAAGACATGA GCTCAATCGT CAGCGGAATA GAACAGCTTT CAAGGCAGTT TTTTTCAATC
CTCGAAAAAT ACGGGCTTGA GAAAATCGAA AGTGAAAAAG CCAGTGAATT TGACCCTCAC
AGGCACGAGG CAGTTCACCA TATCGAGACC TCCGAAGTCC CGGACAATAC TATAGTAGAT
GTTTACAAAA CCGGGTATGC TCTTAACTCT AAAGTTATCA GGCCTGCTAT GGTCTCAGTG
GCCAGAAATC CTGATGAAGC CGAGAAATAA
 
Protein sequence
MKIFNKDGNK NSKEDTKAGA ENSEAQNSGS SAEEVNKARE NPEEASASSE AEKSPEVKCQ 
EEKQVLMEKY YRLAADFDNF KKRTARQMEE NRKAVLEQVL LDFVEVTDNF DRALKSAKTA
EDMSSIVSGI EQLSRQFFSI LEKYGLEKIE SEKASEFDPH RHEAVHHIET SEVPDNTIVD
VYKTGYALNS KVIRPAMVSV ARNPDEAEK