| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3423 |
|---|
| Symbol | |
|---|
| ID | 3624710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4387695 |
|---|
| End bp | 4389125 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637702251 |
|---|
| Product | trk system potassium uptake protein |
|---|
| Protein accession | YP_306876 |
|---|
| Protein GI | 73670861 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.386129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTA GAGTTGTTTT ATATGTACTT GGTGGCTTAC TAAGGCTCCT GGGACTAATT
ATGATAGTCC CTCTCGGAGT TGCATATTAT TATGGAGAGA GTTTAACTCC ATTTCTGGTT
TCGATTCTCA TAACCACACT TACAGGTTTT CTCCTGCTTT CCTATAAAAC TGAAGAGGAA
TGGATGCGCA AGGAAGGCTT TGCAATCGTT GCCCTGGGCT GGCTTGCAGC TGCTGTTTTC
GGGGCAATTC CTTTCATGCT GGACGGGATT TCTCCTTTAA ACGCTGTCTT TGAATCCATG
TCCGGATTTA CGACTACAGG TTCAACAATT CTTACTGATA TAGAAAGCCA TCCAAAAGGC
ATCCTTTTCT GGAGAGGCAT GATTCAGTGG CTTGGGGGAA TGGGTATTAT TGTGCTTTTC
ATCGCGATTC TGCCCAAACT TGGGGTTGCA GGCCGCCAGC TTTTTCGTGC CGAAGCGCCT
GGGCCTACTG AGGACAAACT AAAGCCAAGA ATAAAGGAGA CTGCAAGAAT TCTCTGGGTA
GTTTACTTTG CAATTTCCTT TCTTCAGGTT ATTGTCCTCC TGCTTGCAGG AGTCTCCCTT
TATGATGCCG TTAACCATAC TTTTACTACA ATGGCATGTG GAGGTTTTTC CAATTACTCT
CTGAGCGTTG AAGCTTTTAA CAGCCCTCTT ATTGAGTTCA TAATAACATT TTTCATGTTC
GTTGCCGGTG CAAACTTTGC GCTTCACTAT CGGGCAATTT ACATAGACAA AAAGTTTCTT
CTTAAAGACG ACGAATTTCG TTTCTATACA GGCCTGGTCC TTTCAGCAAC TGGGCTTCTT
GCTATTCTAC TCTGGCGGGA TATGGGCACA GGAATTTTTA ACTCCTTTAG ATTTGCCATT
TTTCAGATCG TTTCAATTAT AACAACTACA GGGTTCGCTA CAGCAGATTT TAATCTCTGG
TCCGATTCTG CCAAAATGGT ACTTATACTG GTAATGTTTA TCGGAGGCTG CGCCGGTTCT
ACAGGTGGAG GCATGAAAGT TGTACGTATC CTTATCCTCC TCAGGTATAG TCGAGCGGAG
TTATTCAAGG TCATTCATCC GAGAGCCATA AGAGCCGTTA AATTTAACAA TAAAAATGTG
TCCGATGAGA TTGTCAATTC TATCGTTTCA TTTGTTGTCA TATATCTGCT TGTCTTTCTC
TTAAGTACCC TGATTCTCTC GGTTTTGGGA ATGGATATTA TAACTTCATT TACCGCGTCC
ATAGCTACGC TTGGTAATAT AGGGCCAGGT CTGAATGTCG TAGGTCCAAT GAGTAGTTTT
GATTCTGTTC CCGCTCTGGG TAAACTGGTC CTGATTGCAA ATATGTGGAT CGGTAGGCTT
GAAGTCTATA CTGTAATTTT ACTCTTTACG CCAGAGTTCT GGAGCAAGTA A
|
|---|
| Protein sequence | MNFRVVLYVL GGLLRLLGLI MIVPLGVAYY YGESLTPFLV SILITTLTGF LLLSYKTEEE
WMRKEGFAIV ALGWLAAAVF GAIPFMLDGI SPLNAVFESM SGFTTTGSTI LTDIESHPKG
ILFWRGMIQW LGGMGIIVLF IAILPKLGVA GRQLFRAEAP GPTEDKLKPR IKETARILWV
VYFAISFLQV IVLLLAGVSL YDAVNHTFTT MACGGFSNYS LSVEAFNSPL IEFIITFFMF
VAGANFALHY RAIYIDKKFL LKDDEFRFYT GLVLSATGLL AILLWRDMGT GIFNSFRFAI
FQIVSIITTT GFATADFNLW SDSAKMVLIL VMFIGGCAGS TGGGMKVVRI LILLRYSRAE
LFKVIHPRAI RAVKFNNKNV SDEIVNSIVS FVVIYLLVFL LSTLILSVLG MDIITSFTAS
IATLGNIGPG LNVVGPMSSF DSVPALGKLV LIANMWIGRL EVYTVILLFT PEFWSK
|
|---|
| |