| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3422 |
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| Symbol | |
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| ID | 3624709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4385492 |
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| End bp | 4386715 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637702250 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_306875 |
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| Protein GI | 73670860 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.351163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGACA TGTATGATGT TTTAGTGATA GGTGCGGGTC CTGCAGGTTC TATTGCCGCC
AGAACCGCAG CCGAAAAAGG GCTGGATGTA CTTTTAATCG AGAAACGCCA GGAGATAGGT
GACCCTGTAC GCTGTGCTGA AGGCGTGAAC AAAGCATATC TCAAAAAATA CGTGGAAATT
GACAAGAGAT GGATTTGTGC TGACCTTAGT GCTTCCCATA TTTACGCGCC GGACGGTACA
AAGATAGAGA TGGCAGAAGA ACTCTCTGGT GGAGAAGTAG GTTACGTCCT TGAAAGAAAA
GTATTTGACC GGGCTCTTGC AGAAAAGGCT GCCGAAGCCG GAGCGGAAGT TAGGGTGAAA
ACCAGAGCCA CTGGCCTTAT CATTGAAGAC GACTTTGTCA AAGGAGCTAG GCTCATGCAT
CTCGGAAAAG AGTATGATGT GCGGGCCAAG ATAGTAATAG GTGCTGACGG GGTCGAATCA
AAGGTAGGCA GATGGGCAGG CATCGATACT TCCTTAAAGC CGATAGACAT AGAGACCTGC
GCCCAATACC TGATAGCTGG AGCGAACATA GACCAGCACC ACTGCGAATT TTACATAGGT
AATGAAATTG CACCTTGCGG CTATATATGG GTCTTTCCGA AAGGCGATGG AAAAGCCAAT
GTAGGGATCG GAGTTCTCGG GAGCAAGACT GGAAAATTCA AACCAAGGCC TGTAGACTAT
CTTAACAAGT TTCTGGAAAA TAAATTTCCC GATGCCAGGA TAGTCGAGAT GGTTTTCGGA
GGAGTTCCGG TTTCGGGTAG CATTGAGAAA ACTTCCACTA ACGGGTTGAT GCTAATAGGA
GACGCTGCCC GCCAATCCGA CCCTATCACA GGCGGAGGAA TTCTTAACGC AATGAATGCT
GGAAAGATGG CAGGAGAAGC TGCATATGCA GCTATATCCG CAGGAGATGT CTCCCTCGAA
AAACTCGAAG AAGTTTATGA GAAACCGTGG AGAGCAACCC TGGGGCACGA TATCGACATG
AGCCTTATAG TAAAGAATTG CTTTATCAAT CTAAGCGATG AAGACCTGAA TTCGCTTGCT
CATTCCCTAG AAAAGGTGAA ATTTGAAAGA ATGAGCCTTC TTGACCTGTT ACAGGCTCTC
TTTAAAGCCG ATAAAAAACT TCTATGGGAC CTTCGAGTAC TTTTCAAAGA TGCCGCAAAA
GAAGTGGTAA AGAATAAGAC ATAA
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| Protein sequence | MKDMYDVLVI GAGPAGSIAA RTAAEKGLDV LLIEKRQEIG DPVRCAEGVN KAYLKKYVEI
DKRWICADLS ASHIYAPDGT KIEMAEELSG GEVGYVLERK VFDRALAEKA AEAGAEVRVK
TRATGLIIED DFVKGARLMH LGKEYDVRAK IVIGADGVES KVGRWAGIDT SLKPIDIETC
AQYLIAGANI DQHHCEFYIG NEIAPCGYIW VFPKGDGKAN VGIGVLGSKT GKFKPRPVDY
LNKFLENKFP DARIVEMVFG GVPVSGSIEK TSTNGLMLIG DAARQSDPIT GGGILNAMNA
GKMAGEAAYA AISAGDVSLE KLEEVYEKPW RATLGHDIDM SLIVKNCFIN LSDEDLNSLA
HSLEKVKFER MSLLDLLQAL FKADKKLLWD LRVLFKDAAK EVVKNKT
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