| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3408 |
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| Symbol | |
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| ID | 3624655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4371619 |
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| End bp | 4372659 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637702236 |
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| Product | F420H2 dehydrogenase subunit H |
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| Protein accession | YP_306861 |
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| Protein GI | 73670846 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00645372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.898909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAG TAATTCCTGA ATATATAACT CCTTTAATTC CCTGGGTCCG TGGAATAGTT
GGCCTTGTTC TGATTGGAGT TATTTTCATG GGAGCAATGG GAGCTGTCTG GCTTGAACGG
AAGCTTTCTG CTGACATCCA AACCAGGATG GGCCCCTGCC GCGTAGGAAA ATATGGGCTT
CTGCAGCTTG TAGCCGATGC AATCAAACTT TTTACAAAAG AAGACTTAAA GCCGCTGAAT
GCTGACAGTT TACTTTTTAA TAATGCTAAT ATTTTCATGC TTGGTTCGGT TTTCCTTATG
CTTGTTGCTC TTCCTGTGGG CGCGGTCTTT ATTAATGGGG TCGAATACCC GCTTGCGGTC
ACCCAGATGG ACATTAGCGT GCTTTACATC GAAGCGGTAT CCGCATTATC CATTTTCGGA
ATTTTCATGG TGGCTTACGG CTCAAATAAC AAATATTCTC TGCTAGGAGC TTTTCGAAAC
TTTGCTCGAA TGGTAGGATA TGAAGTACCT CTTGGAATAA CTGTCATAAG TGTAGCTGCT
ATGACAGGTT CGCTTAATAT AGTAGACATT TCGACTGCGC AGGGCCTGCA CTGGAATATT
TTCCTCCAGC CCCTTGGATG TTTTGTATTC TTTGTATCAC TTATGGCTGA TATGGGAAGA
CTCCCCTTTG ACCAGAACGA GTCCGAAGAA GAATTGATAG CAGGGTGGAT TACGGAATAC
TGTGGAATGC GTTTTGGGCT TGGTTTCTTT GCCGAGTACA TCCACATGAT CCTTGGTTCT
TTCCTTGTAG CCCTTCTCTT CCTTGGAGGC TGGAACGTAC CAGGCTTTAT TGCAAACAAC
TCCTTCTTTG GCATTATTGT TCCAACAGGA TTCCTGATTG TAAAAGTTGT CTTTGTACTT
ATGGTAATTA TAGGGCTCAG ATGGGCTGTC CCAAGGTTCA GGATTGACCA GGTTGTTGAC
CTGAGCTGGA AAAAACTGCT TCCTCTTGCC CTTTTAAATC TTGTCTGGGC TGTAGGGCTC
GGACTCTACC TGGGGGCATG A
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| Protein sequence | MTVVIPEYIT PLIPWVRGIV GLVLIGVIFM GAMGAVWLER KLSADIQTRM GPCRVGKYGL
LQLVADAIKL FTKEDLKPLN ADSLLFNNAN IFMLGSVFLM LVALPVGAVF INGVEYPLAV
TQMDISVLYI EAVSALSIFG IFMVAYGSNN KYSLLGAFRN FARMVGYEVP LGITVISVAA
MTGSLNIVDI STAQGLHWNI FLQPLGCFVF FVSLMADMGR LPFDQNESEE ELIAGWITEY
CGMRFGLGFF AEYIHMILGS FLVALLFLGG WNVPGFIANN SFFGIIVPTG FLIVKVVFVL
MVIIGLRWAV PRFRIDQVVD LSWKKLLPLA LLNLVWAVGL GLYLGA
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