| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3398 |
|---|
| Symbol | |
|---|
| ID | 3624645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4356907 |
|---|
| End bp | 4357404 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637702226 |
|---|
| Product | ribosomal-protein-alanine acetyltransferase |
|---|
| Protein accession | YP_306851 |
|---|
| Protein GI | 73670836 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0084357 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.312955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTG AATTGCGAAA GTGGAACAAA ACCGATGTTG AAAGCTTTTT CAAGTATTCC
CACAATACAA AAATTGCAAA AAACATGAGA GATTCTTTTC CCTCCACTTT AGATGACTGC
AGAAAAACTG TAGAAAGCTT TAGCTGTAAC GATGAAACAC AACAGTGTTG CAGAGCAATT
GTTGTGAACG GAGAAACTGC AGGGTGCATT GCATTATTCC TTAAAAGCGA TGTTTATTGT
AAGAATGCAG AAATTGCATA CTGGCTTGGT GAACCTTTTT GGGGCAGGGG AATAATGAGC
GAAGCAATAA AACAACTTTG TCGGACAGCT TTTGAACAGT ATGATATTGT CCGGATATTT
GCAGAGCCTT ATGCACAAAA TATCGGCTCA AGAAAAGCTC TTGAAAAAGC CGGATTTGTT
TTAGAGGGCA TAATGAAGAA AGGTGTCTAT AAAAATGGTA ATTTTTTTGA TTATTGTATG
TATGCTCTTG TGAAATAA
|
|---|
| Protein sequence | MNFELRKWNK TDVESFFKYS HNTKIAKNMR DSFPSTLDDC RKTVESFSCN DETQQCCRAI
VVNGETAGCI ALFLKSDVYC KNAEIAYWLG EPFWGRGIMS EAIKQLCRTA FEQYDIVRIF
AEPYAQNIGS RKALEKAGFV LEGIMKKGVY KNGNFFDYCM YALVK
|
|---|
| |