Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3387 |
Symbol | rps28e |
ID | 3624824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4345690 |
End bp | 4345911 |
Gene Length | 222 bp |
Protein Length | 73 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637702215 |
Product | 30S ribosomal protein S28e |
Protein accession | YP_306840 |
Protein GI | 73670825 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2053] Ribosomal protein S28E/S33 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000025371 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0615713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATG AAAACATAAC CGGCGGTTTT GCTGCTGAGG TTATTGACGT TATCGGGAAT ACAGGTATGC ATGGTGAAGC CAGTCAGATC CAGTGCAGGG TTCTGGAAGG CAGGGATAAA GGCCGTGTAA TTACAAGAAA CTGCGTGGGC CCGGTCCGCG TAGGTGACAT CCTGATGCTT CTTGAAACCT CAAGAGAAGC AAAGAAACTG ACCACCAGAT AA
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Protein sequence | MADENITGGF AAEVIDVIGN TGMHGEASQI QCRVLEGRDK GRVITRNCVG PVRVGDILML LETSREAKKL TTR
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