Gene Mbar_A3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3377 
Symbol 
ID3624814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4336211 
End bp4336975 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content34% 
IMG OID637702205 
Producthypothetical protein 
Protein accessionYP_306830 
Protein GI73670815 
COG category[S] Function unknown 
COG ID[COG3398] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000923215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00992163 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAAGCCA AAGTTACACG CTTAATATCT ACCAGCGTTA AGCTTCAAAA AAAGCTTACC 
ATTTTCTTAT TATTTTTTCT GTTAACAGCA ACAGCTGGAG CTACGGAATA TATAGTAAGC
CCAGCTCCAG GTGACCAGGT CGGAGTTTCG ATTGACGGAG AAGAGGTAGT ACAACTTAAG
GACTTTACAG TCTACTGGCA GTTCTTGCTC TGGCTGGCTG CGATGCAAAT CTTATCAATA
ATAGACGTAT TGCTGTACTT TACAAAACTC ATTTTCGTGG TACTAGGATT CAAAATTGTA
GATACAGAAA ATGTACTAGA TAATCTTAAT CGGTCCAGTA TTTATACGTA TATCAAGACT
AAACCGGGAG CATGCATTAG TGAAATTGTA GAAAAAACAG GCTTAGGCAG AGGAAAAGTA
AGGCATCATA TAACTATTCT GGCAGTTCAG AACAAAATTG AAGTCCATAA AGATGGCGGA
AAGATTAGGT ATTTCGAAAA TAATTCCACT TATGATGAAG AAGAAATAAA AATTATTTCT
GCTCTTCAAA ACATAACAAA TCAAAGAATA GTTTCAGAAA TACAAAATGG AAAATGTAAT
ACAAACTCAG CTCTTGCACA TGAAATCGGA GTTTCCAGAG CTACAATTAG CTGGTATATG
AGAACTCTTA AAGAAGTAGA ACTCATAAAT GAAGAAAGAA AAGGAAAAAA CATCATTTAT
AGAATAAACC CTTCTTATGA AAATTTGATT GAAAAATATG GATAA
 
Protein sequence
MEAKVTRLIS TSVKLQKKLT IFLLFFLLTA TAGATEYIVS PAPGDQVGVS IDGEEVVQLK 
DFTVYWQFLL WLAAMQILSI IDVLLYFTKL IFVVLGFKIV DTENVLDNLN RSSIYTYIKT
KPGACISEIV EKTGLGRGKV RHHITILAVQ NKIEVHKDGG KIRYFENNST YDEEEIKIIS
ALQNITNQRI VSEIQNGKCN TNSALAHEIG VSRATISWYM RTLKEVELIN EERKGKNIIY
RINPSYENLI EKYG