Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3373 |
Symbol | |
ID | 3625681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4331171 |
End bp | 4332781 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637702201 |
Product | hypothetical protein |
Protein accession | YP_306826 |
Protein GI | 73670811 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0219057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00537819 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTCTCT CTCCCATCTC TGAATCCACA ACTCATCTTG GTCATTATGG CCTTATTGCT GGCATATTTG ACGAACTTGA AATTTCAGAT TTGATTGACA CTCTTCTTCC TAAGAAAAGT GGTCATAACA TTTCTCATTC TACTGTTCTT AAGGCAATGT GCATTAACGG TTTAGGATTT ACTGAACGTC GTCTTTACCT ATTTCCTGCT TTCTTTGAAA ACTTGCCCAC TGAAAGGTTA CTGGGAGAAG GTGTTCTCCC AGAACACCTT AATGATGACG TTTTTGGCAG AACTCTGGAC AAAATCCAGG AATATGGAGC AACCGAAATC TTCAATCATA TAATTCTGCA AGCTATGAAA CACGTTCCTA TTAATCCTCG TTTTTGTCAT TCAGATACTA CAAATTTCAG TGTTTATGGT GACTATAAAA ATGATGATAA CGGCAAAACT ATCAACATTA CTTATGGTCA TCCTAAAGAT AAGAGAGTCG ATTTACTTCG TTTTTCTATT TCTATGGTTA CTGATCAGAA AAGAATTCCT CTGTTTGTGA GAGCGTTAGA TGGTAACAGT TCCGATAAGA AAGTTCTCAT CAAAACCATA AAGGAAGTAA CACAGAACCT GAATCTTGAT CAGAGAGTCT ACCATATTGC AGACAGTGCA TTTTATACTG AAGATAATGT CAAAGAGATA GGAACTAACG CTTTTTTCAT CTCGAGAGTA CCTGCAACCA TCAATGAATC AAAGGAATTA TTGATGACAG ACTTAATTCT GGAAACATGC TCTGATGAAC GTTATTCTTG TTCTGCTGTA AAATCCTGTT ATGGTGGAGT AGAACAGTTA TGGGTTGTAT TCTGTTCAGA GGAAATGAAA AAGAAGGAAG AGAAGAAATT TGATGAAAAG ATTCTCAAAG AGCTTGAAGC AGCAGAAAAG TCTCTTAAAA AGCTTTCTAA TCATGAGTTT GCTTGTGAAG CAGACGCAAG AATGGCTGCT GAACAATGGT TGAAAGAGAA TGAACTGTAT GAATTCCAGA AACTTGAAAT AAAAACTAAG TCACACAGAC TTGGAAACAA GAAAGGAAGA CCAAGGAAAG GTGAAGATGT ACAGACTTTT TACCTGATAG AAGCAGAGAT AAAACACGAC CAGGAGAAAG TACAGGAAAA AAGAGCAAAG TTAGGAAGGT TCATTCTTGC AACCAATGAT CTGGAGTTGA CTCCAGATCA ACTCCTAAAG TACTATAAAG AACAGGGAAC AGTTGAAAGA GGGTTCAGGT TCCTTAAAGA TAAGAGTTTC AGAGTGTCTG AGGTGTACCT GAAAAAAGAG TCCAGAATAG AAGCACTTGC AATGGTAATG GTTCTGTGTT TGTTATTGTA TTCAATAGCT GAATGGAAAC TGAGAACAAG ATTGGAGGAA ACAAAAGAAG CTATTAGAAA CCAAGTAAAG AAGAAAACAC AGACTCCAAC AATGAAATGG GTATTCTTTC AGTTCAGGAG AATAACGGAG TTAGAGATCG AAATTGAGGG AAAGAGGATA AAAAAGGTAT TAAATCTGGA TGAAGAAACA ATTAAAGTGC TGAGATTGAT GGGAGAAAAA TACGAAAAAT ATTATATGTG A
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Protein sequence | MTLSPISEST THLGHYGLIA GIFDELEISD LIDTLLPKKS GHNISHSTVL KAMCINGLGF TERRLYLFPA FFENLPTERL LGEGVLPEHL NDDVFGRTLD KIQEYGATEI FNHIILQAMK HVPINPRFCH SDTTNFSVYG DYKNDDNGKT INITYGHPKD KRVDLLRFSI SMVTDQKRIP LFVRALDGNS SDKKVLIKTI KEVTQNLNLD QRVYHIADSA FYTEDNVKEI GTNAFFISRV PATINESKEL LMTDLILETC SDERYSCSAV KSCYGGVEQL WVVFCSEEMK KKEEKKFDEK ILKELEAAEK SLKKLSNHEF ACEADARMAA EQWLKENELY EFQKLEIKTK SHRLGNKKGR PRKGEDVQTF YLIEAEIKHD QEKVQEKRAK LGRFILATND LELTPDQLLK YYKEQGTVER GFRFLKDKSF RVSEVYLKKE SRIEALAMVM VLCLLLYSIA EWKLRTRLEE TKEAIRNQVK KKTQTPTMKW VFFQFRRITE LEIEIEGKRI KKVLNLDEET IKVLRLMGEK YEKYYM
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