Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3371 |
Symbol | |
ID | 3625679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4328545 |
End bp | 4329312 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637702199 |
Product | hypothetical protein |
Protein accession | YP_306824 |
Protein GI | 73670809 |
COG category | [S] Function unknown |
COG ID | [COG3398] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00157866 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00816683 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGAAAACA GAGCTACAAA TTTGGTGGCG CATTGCATTA ATTATAGGAG ACTCTGTCTC CTTTGCTTTT TATCCTTGTT TTTAATAGTA ACAGCTGAGG CTACAGAATA TATTGTAAGC CCAGCTCTAG GTGATCAAGC TGGAGCTTCA ATTAATGGAG AAAAGGTAGT AAAACTTGAG GATACTGTTA TACCCTACTG GCAGTTTTTG CTCTGGTTAG CTGCGATGCA AATTTTATCA ATAATAGACG TAATTCTGTA CTTTACAAAA CTTATTTTCG TGGTACTAGG ATTTCGAGTT GTGGACCATC CAAGTACTGT TGGGACTCTA AAGAGAAAAC ACATATATGT TTTCATCAAA GCTTGTCCAG GGACGTGTAT CAGCGAGATT GCAAGCGATA TGAGTCTGAG TAGGGGAAAT CTTCGCTATC ATCTCAATAT TCTCGAAGCA GAAAATCTGA TTGAATCCCG CAGTGATTGC GGAAAGATCC GGTATTTCCA GAATAATTCT ACATACGGTG AGGAAGAAAA ACTGGTTATT TCCGTTCTTC AAAATGAGAT GACCCGAAAG ATAATTTATA AGATATTAAA GGAAGAATGC AACACCAACG GAAATCTTGC CCGGACAACA GGAATTTCCA AAGGTGCAAT TACCTGGTAT ATGAAGCAGT TGAATGAATC AGGTCTTGTT AAAGAAGATA AGATGGGAAA GAATACAATA TACAGTATAA ATCCTATTTA TCGGGATGAA ATTGAAAAAC ATATTTGA
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Protein sequence | MENRATNLVA HCINYRRLCL LCFLSLFLIV TAEATEYIVS PALGDQAGAS INGEKVVKLE DTVIPYWQFL LWLAAMQILS IIDVILYFTK LIFVVLGFRV VDHPSTVGTL KRKHIYVFIK ACPGTCISEI ASDMSLSRGN LRYHLNILEA ENLIESRSDC GKIRYFQNNS TYGEEEKLVI SVLQNEMTRK IIYKILKEEC NTNGNLARTT GISKGAITWY MKQLNESGLV KEDKMGKNTI YSINPIYRDE IEKHI
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