Gene Mbar_A3371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3371 
Symbol 
ID3625679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4328545 
End bp4329312 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content37% 
IMG OID637702199 
Producthypothetical protein 
Protein accessionYP_306824 
Protein GI73670809 
COG category[S] Function unknown 
COG ID[COG3398] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00157866 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00816683 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAAAACA GAGCTACAAA TTTGGTGGCG CATTGCATTA ATTATAGGAG ACTCTGTCTC 
CTTTGCTTTT TATCCTTGTT TTTAATAGTA ACAGCTGAGG CTACAGAATA TATTGTAAGC
CCAGCTCTAG GTGATCAAGC TGGAGCTTCA ATTAATGGAG AAAAGGTAGT AAAACTTGAG
GATACTGTTA TACCCTACTG GCAGTTTTTG CTCTGGTTAG CTGCGATGCA AATTTTATCA
ATAATAGACG TAATTCTGTA CTTTACAAAA CTTATTTTCG TGGTACTAGG ATTTCGAGTT
GTGGACCATC CAAGTACTGT TGGGACTCTA AAGAGAAAAC ACATATATGT TTTCATCAAA
GCTTGTCCAG GGACGTGTAT CAGCGAGATT GCAAGCGATA TGAGTCTGAG TAGGGGAAAT
CTTCGCTATC ATCTCAATAT TCTCGAAGCA GAAAATCTGA TTGAATCCCG CAGTGATTGC
GGAAAGATCC GGTATTTCCA GAATAATTCT ACATACGGTG AGGAAGAAAA ACTGGTTATT
TCCGTTCTTC AAAATGAGAT GACCCGAAAG ATAATTTATA AGATATTAAA GGAAGAATGC
AACACCAACG GAAATCTTGC CCGGACAACA GGAATTTCCA AAGGTGCAAT TACCTGGTAT
ATGAAGCAGT TGAATGAATC AGGTCTTGTT AAAGAAGATA AGATGGGAAA GAATACAATA
TACAGTATAA ATCCTATTTA TCGGGATGAA ATTGAAAAAC ATATTTGA
 
Protein sequence
MENRATNLVA HCINYRRLCL LCFLSLFLIV TAEATEYIVS PALGDQAGAS INGEKVVKLE 
DTVIPYWQFL LWLAAMQILS IIDVILYFTK LIFVVLGFRV VDHPSTVGTL KRKHIYVFIK
ACPGTCISEI ASDMSLSRGN LRYHLNILEA ENLIESRSDC GKIRYFQNNS TYGEEEKLVI
SVLQNEMTRK IIYKILKEEC NTNGNLARTT GISKGAITWY MKQLNESGLV KEDKMGKNTI
YSINPIYRDE IEKHI