Gene Mbar_A3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3370 
Symbol 
ID3625678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4326405 
End bp4327475 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content42% 
IMG OID637702198 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_306823 
Protein GI73670808 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0614768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00407786 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAATCAA TAGGCATAGA ATCAACAGGT ATGGAATCAA CAGGTATGGA ATCAACAGGT 
ATGGAATCAA CAGGTATGGA ATCAATGAGC ACTGAATTAG GGCAAAGCGG GATTGTACAT
AAAACAGGTG AATTTGCAAT AGAAACTATT CATTTGAGTA AATTTTTTGG AAAGGAAAAC
CAAATTCGCG CAGTGGATAA CCTAAATCTG CAGGTGAGAA AAGGAGAGGT CTTCGGTTTT
GTGGGTCCTA ACGGAGCTGG CAAGACCACA ACTATGAAAA TGCTTATTGG TTTGCTTGAG
CCAAGCGAAG GAAGCGGAAA GGTTGCAGGT TTCGATATCA TCCGTGAGGT AATAAATATA
AGAGAACAGA CAGGAGTCCT TCCCGAACCT GCCGGTTTTT ATGATAATCT CACTGCAAGG
CAGAACCTGC GTTTTTATGC AAAGCTCTAT AATATCGAAC CCGATGTTCG GGAAAAAAGG
ATTGTAAATT TACTTGAAAC TGTAGGTCTT ACCCGTGCCA TTGACCAGAA AACAGGCGGT
TTTTCCACAG GCATGCGAAA GCGTTTTGGG CTTGCCCAGG CTTTGATCAA CGAACCCTCA
GTCCTTTTCC TTGACGAGCC AACAAGTGGT ATTGACCCTC TTGGCGCTCA GATGATGAGG
GACCTTATAA AAGACCTGAA CCGAAGTAAA GGAGTTACCG TTTTTCTGAG TTCGCATTCT
ATGGAAGAAG TTGAAGAGAT CTGCGACCGC ATAGCAATAA TTGCAAGAGG AAAACTTCTG
GCAGTAGGGT CTGTGGAGGA TTTGCGAGAT ATTGTAAGAG CAAAGGAAGG TGTGAATTAT
TTGCTTGAGG TTCAGGATAT TCCCATCTCT GAAACTGCAG AAATCGTAAG AAATGTGGAG
GGGGTACAGG CTCTTGAAGT TCGGAATGAA GTTCTATACA TCCATACCAA AATGAAGCTC
CGTACAGAAA TTGCAAAAGC TGTCAAGAAG GCAGGTGGTA CGGTATCCAT GTTCGAAGAA
GAGGAAATGA ATCTGCAAAA GCTGTTCCTC AAAATTATAG AAGGAATATA A
 
Protein sequence
MESIGIESTG MESTGMESTG MESTGMESMS TELGQSGIVH KTGEFAIETI HLSKFFGKEN 
QIRAVDNLNL QVRKGEVFGF VGPNGAGKTT TMKMLIGLLE PSEGSGKVAG FDIIREVINI
REQTGVLPEP AGFYDNLTAR QNLRFYAKLY NIEPDVREKR IVNLLETVGL TRAIDQKTGG
FSTGMRKRFG LAQALINEPS VLFLDEPTSG IDPLGAQMMR DLIKDLNRSK GVTVFLSSHS
MEEVEEICDR IAIIARGKLL AVGSVEDLRD IVRAKEGVNY LLEVQDIPIS ETAEIVRNVE
GVQALEVRNE VLYIHTKMKL RTEIAKAVKK AGGTVSMFEE EEMNLQKLFL KIIEGI