| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3361 |
|---|
| Symbol | |
|---|
| ID | 3625669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4313946 |
|---|
| End bp | 4314710 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637702189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306814 |
|---|
| Protein GI | 73670799 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3398] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000089037 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0139562 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAACA GAGCTACAAA TTTGGTGGCG CATTGCATTA ATTATAGGAG ACTCTGTCTC
CTTTGCTTTT TATCTTTGTA TTTAATAGTA ACAGCTGAGG CTACGGAGTA TGTTGTAAGT
CCTGCTCCAA ACGATGAATT TGGGGTGTCC GTAGCTGGAG AAGAAGTAAC ACAAGTTAGA
GACTTTACAG TATACTGGCA GTTTTTGCTC TGGCTGGCTG CAATGCAAAT TTTATCAATA
ATAGACGTAT TGCTGCACCT TGCAAAGCTT ATTTTCGTGG TACTAGGATT CAAGATTAAA
GGGCAAGCAA ATGAACCTGG TAGCTCCAGC CAATCTAAAG TTTATGACTA TATTAAAACT
AGACCTGGAA CATACATTAG TGATATTGTA AATAAATTAA ATTTAAATCG GGGAGCAGTC
AAATATCATA TAAAAAATCT TAAAGCTCAA AACAAAATCG AAGCCTATAA AGATGGAGGA
AAAGTAAGAT ATTTCGAAAA CAATTTCAGT TATGATAACG AAGAAAAAAT AATCATCTCT
GCCCTTCAAA ACGTAACAAG TAAAAAAATA GTCTTAGAAA TAAGAAATGG TCAGTGTACT
ACAAATATAG CTCTTGCACA GGAAATTGGA GTTTCGAGGG CTACTATTAG CTGGTACATT
AAGAACCTTA AAGACATAGG GATAGTTCAG GAAACAAAAA AAGGAAGAAA TATAATTTAT
AGAGTAAATC CTTCTTATGA AAACTTTATT GAAAAATACA AGTAA
|
|---|
| Protein sequence | MENRATNLVA HCINYRRLCL LCFLSLYLIV TAEATEYVVS PAPNDEFGVS VAGEEVTQVR
DFTVYWQFLL WLAAMQILSI IDVLLHLAKL IFVVLGFKIK GQANEPGSSS QSKVYDYIKT
RPGTYISDIV NKLNLNRGAV KYHIKNLKAQ NKIEAYKDGG KVRYFENNFS YDNEEKIIIS
ALQNVTSKKI VLEIRNGQCT TNIALAQEIG VSRATISWYI KNLKDIGIVQ ETKKGRNIIY
RVNPSYENFI EKYK
|
|---|
| |