Gene Mbar_A3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3350 
Symbol 
ID3626208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4301841 
End bp4303037 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content45% 
IMG OID637702183 
Productaldo/keto reductase 
Protein accessionYP_306808 
Protein GI73670793 
COG category[R] General function prediction only 
COG ID[COG1453] Predicted oxidoreductases of the aldo/keto reductase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.343434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.051891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTACA GAAAAATTCC AAAGAACGGA GATGGACTTT CAATACTGGG ATTCGGATGT 
ATGCGCCTTG CAGCCAGGGA CGGAATGATA GATGAAGAAA GGGCTACCCG GCAAGTTAGA
TATGCAATTG ATCACGGAGT AAACTATGTC GACACGGCCT GGCCGTATCA CATGGGAGAA
AGTGAGCCTT TCCTTGGGCG GGCTCTTGCA GATGGATATA GAGAAAAAAT TAAACTTGCT
ACAAAACTTC CTTCCTGGAC AATAAATAGT AGAAAGGATA TGGACAGTAT CCTGAATGCC
CAACTTGAAA GGCTCAGGAC TGACCATATC GATTATTACC TTGTTCACGG GCTTGTAGGA
CTTTTATGGG ACAAAATGGA AAAGCTTGAA GTGCTGAATT TTCTTGATAG GGCAAAAGCT
GACGGCCGAA TTATAAATGC AGGTTTCTCC TTCCACGGAT CGGCAGGGGA TTTCAAACGG
ATTGTAGATG CATATCCCTG GACTTTCTGT CAGATTCAAT ATAATTTCCT CGATGAAAAG
AATCAGGCAG GAACGGAAGG GCTTGAGTAT GCTGCTTCAA AAAACCTGGG TATTATTATC
ATGGAACCCC TGCGAGGAGG CAAGCTGACA AATCCCGTAC CTCCTGAAGT ACAGGAGATC
TGGAATGAAG CTCCTGTAAA GCGCACTCCA GCCGAATGGG CCCTTCGCTG GATCTGGAAC
CGGCCCGAGG TTACAGTTGT GCTTTCAGGC ATGAATGAAG AGTCTCATAT TGAAGAAAAC
CTGAAAACCG CATCTGAAGC CTATCCAAAC TCTCTGACTG AAGCCGAACT GCAGCTTATA
AAAAAAGCGG AACAAAAATA CAGGAAACTT ATGAAAACCG GTTGTACGGG CTGTAGATAT
TGTATACCCT GCCCTTCAGG CGTCGATATT CCTGGCTGTT TTGAGATCTA CGATAACTTT
TACCTGTCAG GTAATGAAAA AGAAGCAAAA CTTATGTATG CGGCAAAGCC AGGGGGAATA
ATAAGAGGGG ATGCAGCAGG GTATGCCTCC CAGTGCGTCC AGTGCGGACA GTGCGCTGAA
AAATGCCCAC AGCACCTGGA TATTCCTTCC CTGCTCGAAG CCGTGAAGGA AAAATTTGAG
GGCAAAGACC ATAAGGGATG GAGAATGATA GCGAAAAAAG CATTCAGAAA AGAGTAA
 
Protein sequence
MLYRKIPKNG DGLSILGFGC MRLAARDGMI DEERATRQVR YAIDHGVNYV DTAWPYHMGE 
SEPFLGRALA DGYREKIKLA TKLPSWTINS RKDMDSILNA QLERLRTDHI DYYLVHGLVG
LLWDKMEKLE VLNFLDRAKA DGRIINAGFS FHGSAGDFKR IVDAYPWTFC QIQYNFLDEK
NQAGTEGLEY AASKNLGIII MEPLRGGKLT NPVPPEVQEI WNEAPVKRTP AEWALRWIWN
RPEVTVVLSG MNEESHIEEN LKTASEAYPN SLTEAELQLI KKAEQKYRKL MKTGCTGCRY
CIPCPSGVDI PGCFEIYDNF YLSGNEKEAK LMYAAKPGGI IRGDAAGYAS QCVQCGQCAE
KCPQHLDIPS LLEAVKEKFE GKDHKGWRMI AKKAFRKE