Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3346 |
Symbol | |
ID | 3626204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4297714 |
End bp | 4298616 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637702179 |
Product | hypothetical protein |
Protein accession | YP_306804 |
Protein GI | 73670789 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.605131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0139562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTC GATTGACAAA TAGAACTCAT GCAAGCGAAA TAAAACCTGC AAGACCAAAA AGTGAGCGTT TTTTTGCCTG TTTGCTATTA ACACTTCTTC TTTTTGGTTT ACTAACTTCT CCAGCAATAG CTAAGACTAA CTGGGATATT TCTCCCTCAC ATCCGAATGT TGGAGATACT CTGAAACTAA CAGGCACAGC TTCTCCGGAA GAGGAGCTCG GAGCTGATAT TTCATTTAAA AAAGAGCTCC CTGTTACCGA AGGCAGGTAT CAGTATTTAC TTGAAGAAAT AAGGATCCCG TACGGTAAAA ATAACCTTTT TACTGTCACA GGTAAGGGAG TGGAGAACCT TGACGTAAGC GTAAAGAAAC TGATCTGGAT CAAACTGTCT TCTGATGCAT CCGGTGGAAC TGCAACCATT TCTCAAGGAC ATGTTCCTCC TTTAACTTAC AAAATTCTTA TTAGTGGCGA TGCTCTGAGT AAAGCCTCTT CCGTAAAACT TACAGTTACG GCATCTCAGA CTATAACAGC TGACTCAAAC GGAAATTTCG AATTTAATTA TGACACTTCT GCATTGCCCG CAGGCAAATA TGTAGTAACG ATAGGGAATA AGGCAAAAAC AATCGAACTT GGATCTGGAA ATCAAAATGC ACCTGCTATC AGTAGTATCT CACCTTCAAA AGGACCAAGT GGTGAACAGG TAACTATAAC TGGAACAGGT TTTTATGGAG CAACAGGTGT CTATTTTGGA GGGAAAAAAG CCAGTTATTA CTCAATTCAA GGTGGTACTA AGATTGTTGT ACCTGCCCCG AAAGGAAGCG GAACTGTTCA AGTAACAGTA AACTCTGAAA ATGGAAAGAG CAATAGTGTA TCATATACCT ATACTTCACC GAAAATCAGT TAA
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Protein sequence | MKIRLTNRTH ASEIKPARPK SERFFACLLL TLLLFGLLTS PAIAKTNWDI SPSHPNVGDT LKLTGTASPE EELGADISFK KELPVTEGRY QYLLEEIRIP YGKNNLFTVT GKGVENLDVS VKKLIWIKLS SDASGGTATI SQGHVPPLTY KILISGDALS KASSVKLTVT ASQTITADSN GNFEFNYDTS ALPAGKYVVT IGNKAKTIEL GSGNQNAPAI SSISPSKGPS GEQVTITGTG FYGATGVYFG GKKASYYSIQ GGTKIVVPAP KGSGTVQVTV NSENGKSNSV SYTYTSPKIS
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