| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3325 |
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| Symbol | |
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| ID | 3626104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4267921 |
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| End bp | 4270737 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637702158 |
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| Product | cell surface protein |
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| Protein accession | YP_306783 |
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| Protein GI | 73670768 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00941994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGATA GGGGAAAATT GCATTCAGTA CCTTTAGTGT TAATGGCATT ATTTTTCGTA
TTTTTGGTTT CAAACTCAGC TGTAACGTTA GCTGCCCAGG AAATTAAGCT CTCAGAGGAT
ATTGGACTAA ATGGAGAGAC TTCTATTTAC GGTGATAAAG TGGTGTGGTC ATATTGGGAC
AAAATTCATC TTTATGACCT AAAAACCGGA AATGATACTA TAATTACCAT GCCTGAACAT
TATGTATCAC ATCCTGCTAT ATATGATAAT AAAATTGTAT ACTGTCTTTA TAATGTAAAT
GAGAATCCAG TTAGGGTCAG ACTTTACGTG TATGATATAC TTAATTCTAC AAGTTCACTA
ATCACAGAGA ATTTGTCCCA TTGTGTTCCT GATATTTACG GTGATAGAAT TGTGTGGGCT
GCGGAACGCG ACTACAAGAC CGATGTCTAC ATGTACAATA TTTCCACTCA TACACAAACT
CAGATAACCA CAAGAGGATC TGCAAGTAAC CCTTCAATAT ATGAAAACAA AATAGTATGG
GTGGGTTACG GGGACAATGG AACTATTATA GATAAAAATA ACAATTCCAT TAGCAGAGAT
AGTATTTGCA TTTATGACCT TTCCACTAAG AAGGAAACTA TGATCAACAC TATCGGAAGA
GCATATGCTC CCGTGATCTA CAGTGATAGG ATAGTATGGA AGGATAGTCG CAATTCAGAC
TTTACTGGGA GAAGAGGGGA TGTCTACATG TATAACCTCT CAACTGAGAA AGAAAGCCGG
ATCTCTTACA GCGGACAGTC CTCGTTAGGT TCGTCTCCAG CTATCTATGG GGACAGGATA
GTATGGGATG ATAATCGCAA TGGAAAATGG GATATTTACA TGTACAATCT CTCAACTAAG
AAGGAGACTC AGATTACCAC CAGTGGAAGT GCAATGGGAC CTGATATCTA CGGAGACAGG
ATAGTGTATA GTGATAATCG TCAAAGATTG ACCCCTGGTC CTGGTGATGT TTATTTTTGT
GATATCTATG TGTATGATCT CACTGCTAGA CCCATAGAAC CACAAGCTGG GTTTACATCC
AATGTGACTT CCGGAATAGC ACCTCTAACG GTATTATTCA CTGATACCAG CACTGGTGGA
GTACCAACTT CCTGGCATTG GGACACTGGT GACGGTATTT ACTCAAAACA TGCCATGAAT
GCAACCCATA CGTTTACAAA CCCAGGGGTG TATAACGTTA CTTTAACAGT TACAAATGAA
GCAGGCAATA GCACGGTAAC GAAACCGAAT TATATTACTG TAACTCCCCC ACAACCACCA
GTGGCAGATT TTTATGCTAA TGTAACCTCT GGAAAAGCAC CTCTAATGGT GTCTTTCCAT
GGTAGAATTA TTGGCAAAGC TACAAGTAAA GGCGAAGAAC CTATTTCCTG GTATTGGGAT
TTTGGCGATG GCATTTATTC AAAACACACC ACGAATGCAA TCCACACATT TCACACCACG
AATGCAATCC ACACATTTAC AAAACCAGGG ATTTACACAG TAAATCTTAC TGTAGGAAAT
TTCGTGGGTA ATAGTACAGC GACAAAGCCA GATTACATAG TTGTTATCGA TCCAAAAGCT
CCCGATGCAA ATTTTAGTAG TAACATTATC GAGGGTTATG TTCCCCTGAC GGTACAGTTT
AATGACACTT CTCAAAATGC AACGTCAAGG GTATGGGACT TCGACAATAA TGGAAAAACA
GACTCAACCG ATGTAAACCC TGTTTATACA TTTACAACAC CAGGAATCCA TACTGTTAAC
CTGACAGTAA GAAATGCTTA CGGCACTACC TCAAAAACTG ATACGATAAT TGTACTTACA
GAAAATGAGA TCCGGATTAC AACCAGCGAA TTAGCATCCC ATCCTGATAT CTATGGTAAT
AGAATAGTAT GGCAAGACCT TCGCAACGGA AACTACGATA TCTACATGTA CGATCTCTCC
ACTTCCAGGG AAACCAGGAT CACTGCTAAT GAATCAAATC AGACATATCC TTCACTCTAC
TGTGATAGAA TAGTGTGGCA AGATGATCGT AATGGACAGT ATGATATCTA TATGTACAAT
ATATCTACTT CAAAAGAAAC TCAAATAAGC ACTAGCGGGC GCGCTCAGAG ACCTAAAATC
TATGGTGACA GGATAATGTG GATGGATTAT CGAACTAGAA ATAAAGGTAT TTACGTGCAC
GACCTATCCA CTTCTAAGGA AACTCGGATA ATTTCAAAAG GAATACCTCA ATATATTAAT
ATGCAAGGTA ACTTGATAGT CTGGCATGAT CTTCGATACA TAAGTCCGGA TATTTACATG
TACGATCTCT CCACTTCAAA GGAAACTCAA ATAACCTCCA ACGGAGAAGC AACATTCCCT
AACGTCTATG GTAACAGGAT AGTGTGGAAA GAGTGGCACA GAGAAGATGT CACCACCGAT
ATCTACATGT ACGATTTATC CACTTCCAAG AAGACTCAGA TTACTACCAA TAAATCAAGT
CAATACTATC CTGCTATTTA TGGTAATAAG ATAGTATGGG AAGATTTCCG CAACGAATAC
ATCAATATTT ACATGTACGA TCTCTCAACT CAGAAGGAGA CTCAGATTAC CACCAGCGGA
GGTGCACACG ATCCTGATAT CTATGGAGAC AGGATTGTAT ATAGGAAGTA TAGTTATCAT
AGATCACCCG TTGATCATGT TTTTTTTAGT GATATCTATA TGTATGATCT CACTGCTAGA
CCCATGGAAC CACAAACTGG ACTTACATCC AATGTGACTC TAGAACAACA CCTCTAA
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| Protein sequence | MKDRGKLHSV PLVLMALFFV FLVSNSAVTL AAQEIKLSED IGLNGETSIY GDKVVWSYWD
KIHLYDLKTG NDTIITMPEH YVSHPAIYDN KIVYCLYNVN ENPVRVRLYV YDILNSTSSL
ITENLSHCVP DIYGDRIVWA AERDYKTDVY MYNISTHTQT QITTRGSASN PSIYENKIVW
VGYGDNGTII DKNNNSISRD SICIYDLSTK KETMINTIGR AYAPVIYSDR IVWKDSRNSD
FTGRRGDVYM YNLSTEKESR ISYSGQSSLG SSPAIYGDRI VWDDNRNGKW DIYMYNLSTK
KETQITTSGS AMGPDIYGDR IVYSDNRQRL TPGPGDVYFC DIYVYDLTAR PIEPQAGFTS
NVTSGIAPLT VLFTDTSTGG VPTSWHWDTG DGIYSKHAMN ATHTFTNPGV YNVTLTVTNE
AGNSTVTKPN YITVTPPQPP VADFYANVTS GKAPLMVSFH GRIIGKATSK GEEPISWYWD
FGDGIYSKHT TNAIHTFHTT NAIHTFTKPG IYTVNLTVGN FVGNSTATKP DYIVVIDPKA
PDANFSSNII EGYVPLTVQF NDTSQNATSR VWDFDNNGKT DSTDVNPVYT FTTPGIHTVN
LTVRNAYGTT SKTDTIIVLT ENEIRITTSE LASHPDIYGN RIVWQDLRNG NYDIYMYDLS
TSRETRITAN ESNQTYPSLY CDRIVWQDDR NGQYDIYMYN ISTSKETQIS TSGRAQRPKI
YGDRIMWMDY RTRNKGIYVH DLSTSKETRI ISKGIPQYIN MQGNLIVWHD LRYISPDIYM
YDLSTSKETQ ITSNGEATFP NVYGNRIVWK EWHREDVTTD IYMYDLSTSK KTQITTNKSS
QYYPAIYGNK IVWEDFRNEY INIYMYDLST QKETQITTSG GAHDPDIYGD RIVYRKYSYH
RSPVDHVFFS DIYMYDLTAR PMEPQTGLTS NVTLEQHL
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