Gene Mbar_A3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3322 
Symbol 
ID3626101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4263499 
End bp4264476 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content43% 
IMG OID637702155 
ProductNADH-dependent flavine oxidoreductase 
Protein accessionYP_306780 
Protein GI73670765 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.470336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0119849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGA TAACAGATGA ATTAGTGATT CGTGGGAATC ACATAAAAAA CCGAATTGTG 
ATGCCTCCTA TGGTTACTTT TTCCTTTCAC GGAGATAATG GCTCTCATTA TGGCAAGCAG
CACATTGAAC ATTATACGAA ACGTGCAAAA GGCGGTACTG GCCTTATCAT CGTGCAGGCT
ACCAGCGTTT TTGGGGCTGT AGATTCAACA GGCATGTGGT CGGCAGGTGA TATCTCAGCT
TTAAAGCAAA TTGCAAGCAA CTGCCACGAA TATGGCGCAA CAGTAATGAT GCAGCTTCAT
TGCGGCAATA TGGATATTAA CGAATTGTCA ACCGAAGAAA TTCATTCGAT GCAAAAAAAT
ATGAAGCAGG CAGCCATTCG TGCCTGTGAA ATTGGGTTTA ATGGCGTTGA ATTTCATTTT
GCATACGGAT TTACCTTATG TAAGTTTCTT GATGCTTCTT ACAATCGCCG AACCGATAAG
TATGGCGGCG ACGTTCTATA CAGGGCAAGA GTTTTAACAC AAATTCTGCC GGAGATTCGA
AACAACACTC CTAAAAATTT CATTGTTAGT GTGCGCATGG GCGAGTATCT GCCGGAAAGC
AAGGACGGCA TTGAAGCAGC CAAAGCTTTT GAGAAAGCCG GTATTGATTT ACTGCACATT
TCATTTGGCA TGCAGCCCCC AGCAAATACG GTTCCCGACG GTTTCATTTG CAGTCCTATA
ACCTATAGTG GCTGTAAGAT CAAAAAAGAA GTAAAGATTC CAGTTATTGC AGTTAATGAA
ATCCGCACTG AAGAACAGGT ACGGTTCTTA ATTGAAAATG ATTATGTGGA TCTTGTTGCT
GTTGGCAGGG GTATGTTAGC TGACCCTGAA TTTGCTAATC ATGTGATAAA CAGCGAGCCT
GTAAACACGT GCTTGGGATG TGAGAGGTGT TTCTGGTTTA CAGATCATAC GCTTTGTCCG
GCAGGAAAAA ACGAGTGA
 
Protein sequence
MTEITDELVI RGNHIKNRIV MPPMVTFSFH GDNGSHYGKQ HIEHYTKRAK GGTGLIIVQA 
TSVFGAVDST GMWSAGDISA LKQIASNCHE YGATVMMQLH CGNMDINELS TEEIHSMQKN
MKQAAIRACE IGFNGVEFHF AYGFTLCKFL DASYNRRTDK YGGDVLYRAR VLTQILPEIR
NNTPKNFIVS VRMGEYLPES KDGIEAAKAF EKAGIDLLHI SFGMQPPANT VPDGFICSPI
TYSGCKIKKE VKIPVIAVNE IRTEEQVRFL IENDYVDLVA VGRGMLADPE FANHVINSEP
VNTCLGCERC FWFTDHTLCP AGKNE