Gene Mbar_A3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3319 
Symbol 
ID3626098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4260664 
End bp4261449 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content44% 
IMG OID637702153 
Producthydroxyethylthiazole kinase 
Protein accessionYP_306778 
Protein GI73670763 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2145] Hydroxyethylthiazole kinase, sugar kinase family 
TIGRFAM ID[TIGR00694] hydroxyethylthiazole kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.471859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0259997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACC CATTAAAAAC AATAAGAGAA ACAAAACCAC TCATACATCA TATAACGAAC 
TGGGTAACGA TCTACGACTG TGCAAACATG ACAAGAGCTT TTGGTGCGCT GCCTGTAATG
GCGCATGCCT CTGAAGAATG TGCTGAGATG ACAGGGATTT CATCGGCTCT TGTACTTAAC
ATCGGAACCC CGACATCCGA AATCATTGAT TCCATGCTTC TGTCTGCTGC CGCTGCAAAC
GAAAAGAAAA TTCCGGTCGT GCTTGACGCA GTCGGGGTCG GAGCTACGAA ATTCAGGGAC
GAAATGGCTG CAAAAATCCT TGGTTCCGTC CGTGTTGATA TCATAAAAGG CAATTACTCG
GAAATTGCAA AACTGGCAGG CGAAAGCGCT GAAACTAAAG GAGTTGAGGC AACTTCGATT
AATGCGGACC CTGTAAAGAT TGCAAAGCAA TTTGCAAAAT TAAGTTCCTC CGTTATTGTG
ATGACAGGAA AAGAAGACAT TATAAGTGAC GGAGAGAGGG TTTTTATTGT TAAGAACGGG
CATGAGCTTA TGGGGTCGAT TGTCGGAACA GGATGTATGG CTGCATCTGT AATAGGTTTG
TTTGCTGCAG TTAACCCGGA TTACTTTGAA GCGTCCAGAG AAGCGTTATG TTACTTTGGG
GTTGCAGGAG AACTTGCAGC TCGAGAATCA AACGGACCAG GAAGTTTCAA GGTTAACCTG
TATGATGAAG TGTTCAACCT GTCGGATGAG AAAGTAAGAA GTATGATGAA TTTTGAAGAA
CAGTAA
 
Protein sequence
MNDPLKTIRE TKPLIHHITN WVTIYDCANM TRAFGALPVM AHASEECAEM TGISSALVLN 
IGTPTSEIID SMLLSAAAAN EKKIPVVLDA VGVGATKFRD EMAAKILGSV RVDIIKGNYS
EIAKLAGESA ETKGVEATSI NADPVKIAKQ FAKLSSSVIV MTGKEDIISD GERVFIVKNG
HELMGSIVGT GCMAASVIGL FAAVNPDYFE ASREALCYFG VAGELAARES NGPGSFKVNL
YDEVFNLSDE KVRSMMNFEE Q