| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3318 |
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| Symbol | thiE |
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| ID | 3626097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4259837 |
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| End bp | 4260499 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637702152 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_306777 |
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| Protein GI | 73670762 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.195577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0232291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAGA AAGGCTTCAG CCGGAAAAGT TCCCTTTTGA AAGAAATCGA TTTCTATCTC
GTGACAGATT CCGGACTCTC AATGAAAGGG ACTTTATCCG ATGTCAGGGA CGCAGTTGAG
TCAGGCTGCA GGATTGTTCA GTACAGAGAA AAGGATAAAA GTACGAAAGA AATGGTCGAA
GAGGCTTCCG AAATCAAGAG GATCTGCAGC GGCAGGGCAA TATTTCTGGT AAACGACAGG
ATCGATGTTG CTTTAGCAGT TGACGCGGAT GGAGTCCATA TCGGCCAGGA TGACATGCCT
GTTGAAACAG CAAGAAAGCT CCTTGGTGAG GATAAGATAA TCGGCCTTAG TGTAAATGAC
AGGGAAGAAG CAGTCTTGGC GGAAAAATTA GGGGCTGACT ATGTGGGTCT TGGCCCAATA
TTCGATACTG CTACAAAAAA AGATGCAGGA GAGGGAATTG GTCCACTTAA AATCCGAGAA
GTTAAAGATG CAATCAAGCT TCCTGTAGTT GCTATTGGCG GGATAAATAA AGAAAACTGT
GAGAGTGTTA TTCAAAACGG AGCTGACAGT CTGGTCGCAA TTTCTGCAGT TGTGTGCAGT
AACGATGTAA AAAGAGAAGC TAAGTACTTT ATTGATATGA TTCGGAGAAC CAGAAAAGCA
TGA
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| Protein sequence | MKQKGFSRKS SLLKEIDFYL VTDSGLSMKG TLSDVRDAVE SGCRIVQYRE KDKSTKEMVE
EASEIKRICS GRAIFLVNDR IDVALAVDAD GVHIGQDDMP VETARKLLGE DKIIGLSVND
REEAVLAEKL GADYVGLGPI FDTATKKDAG EGIGPLKIRE VKDAIKLPVV AIGGINKENC
ESVIQNGADS LVAISAVVCS NDVKREAKYF IDMIRRTRKA
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