| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3306 |
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| Symbol | |
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| ID | 3626800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4244250 |
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| End bp | 4245728 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637702141 |
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| Product | efflux PumP antibiotic resistance protein |
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| Protein accession | YP_306766 |
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| Protein GI | 73670751 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.403535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0962569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG ATACAAATAA CGCCGGGTCA CCCGCCAAAG TTCCGGAAAT CTACAATACA
CCTGATGCTC CTGTTGTCGG TACAGGTAAA CAGGTCGTGC TTTTCATTGC GATACTTTCG
GGATTTATTA CCCCTTTTGA TGGTTCGGCA GTAAATATTG CCCTGCCTGC GATTGGGGCC
GAATTTCACA TGGATGCTAT TGCTCTTTCC TGGGTTGCGA CAGCTTACCT CCTTTCATCA
GCATTGTTTC TTGTCCCTTT CGGAAAAATC GCAGACATCT ATGGAAGAAA AAAAATTTTC
CTCTATGGTA TTACGCTCTT CAGCTTTTCG TCTTTAATTA TGACCATGGC TTCTTCATCG
GAAATGCTGA TTGGAATACG GGTTATGCAG GGTATCGGGA GTGCAATGAT TTTCGGGACA
GGCGTCGCCA TCGTTACCTC AGTCTTCCCG CCCGGTGAGC GTGGAAAAGC TCTTGGTACC
TATATAACTG CAGTTTACAT TGGGCTTTCT GTTGGTCCTT TACTCGGAGG CGCGATGACG
CAGTATCTTG GCTGGAGGAG CATCTTCTTC GTAAATGTTC CTATAGGCAT TACAGCAATT
CTCCTGATCT TATGGAAGAT CAAAGGTGAA TGGGCTGAGT GCAGAGGGGA GAAGTTCGAC
CTGACAGGAT CAGTCATATA CGGTGCATCG GTAGTTGCAG TAATGTACGG TTTTTCAGTT
CTCCCGGACT TTAAAGGGGC TGCTCTCTTA GCTATGGGAA CTCTTGGAGT AATTATTTTT
GCTCTATATG AGATTAGAAC ACCTTCTCCC GTACTTGATA TTAGTCTACT GACAAAAAAC
AGAATTTTTG CCTTTTCAAA CCTATCTGCG CTAATCAATT ACAGTGCTAC TTACGCAGTG
ACCTTTCTTT TAAGCCTCGA TCTTCAGTAC ACGAAAGGCT TTACTCCTGA ACATGCCGGA
TTTATCCTGG TAGCACAGCC AGTTATCATG GCTATGGTTT CGCCAATTGC CGGCCGGCTC
TCTGACAGGA TTGAACCGCG GATTGTTGCG TCCGCAGGGA TGGCATTTAC TGCTCTTGGG
CTCTTCCTTC TAATTTTCCT TACAGAAACA ACTCCTATCT GGCACCTCAT AATCACCCTG
ATTATTCTTG GTATAGGTTT TGGGCTTTTC TCGTCTCCAA ACACGAATGC AATCATGAGC
TCCGTTGATA AAAGATTCTA CGGCGTTGCA TCGGGGATGA ACGGGACTAT GCGGCTCCTT
GGGCAGATGC TGTCGATGGG TATCGCAATG ATGATCTTTG CAATTGTTAT CGGTCCTGTA
GAGATCACGC CTGAATATTA CCCCCAGTTC GTTTTAAGCC TGCATTATGC TTTCACGCTG
TTTACAGCCT TCTGTATTCT TGGAATATTC GCATCTCTAG TGAGAGGAAA AAGGAGTCCT
GTAGCTCACG CCAGTATTCC TGAAAAAGGC AAAAAATAA
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| Protein sequence | MKKDTNNAGS PAKVPEIYNT PDAPVVGTGK QVVLFIAILS GFITPFDGSA VNIALPAIGA
EFHMDAIALS WVATAYLLSS ALFLVPFGKI ADIYGRKKIF LYGITLFSFS SLIMTMASSS
EMLIGIRVMQ GIGSAMIFGT GVAIVTSVFP PGERGKALGT YITAVYIGLS VGPLLGGAMT
QYLGWRSIFF VNVPIGITAI LLILWKIKGE WAECRGEKFD LTGSVIYGAS VVAVMYGFSV
LPDFKGAALL AMGTLGVIIF ALYEIRTPSP VLDISLLTKN RIFAFSNLSA LINYSATYAV
TFLLSLDLQY TKGFTPEHAG FILVAQPVIM AMVSPIAGRL SDRIEPRIVA SAGMAFTALG
LFLLIFLTET TPIWHLIITL IILGIGFGLF SSPNTNAIMS SVDKRFYGVA SGMNGTMRLL
GQMLSMGIAM MIFAIVIGPV EITPEYYPQF VLSLHYAFTL FTAFCILGIF ASLVRGKRSP
VAHASIPEKG KK
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