Gene Mbar_A3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3290 
Symbol 
ID3627900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4229014 
End bp4230078 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content31% 
IMG OID637702126 
Producttransposase, putative 
Protein accessionYP_306751 
Protein GI73670736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.56816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTATTA CGAAACCTCC ACTTATACCA CTAAATGAAG ATTTCAAATG GCAATTGTTG 
TCCGAAATAT TAAATGTTTT TGATTTGAGA TTCTGTAAGC AAACTCTTAC AAGGAGGGGC
ATTGTGCCCC TCCACAGATC AGTACCTACT ATAAAAATTG TTCTTCTAAG CATGTTTTTT
TCTTGTGAAA TCTCTTATGC TATAAAGGAA TTAAAAGAAA GAGAAATCTT GAGAAACTTT
TTAAAAATCA GTTTAGTACC AACTGAAAAG GAAGTTTATG GCATTCTTAG TAAGTATGAA
CCCCAAGAGT TTACTGCTTT TGTTTTTGAA ATATTGAATG ATTTATGCCC TAAGAGAAAA
AATGGATCAA GAGACATTAT TATTGATAGT ACTGACATAA ACCTTAACCT GAACTGGCAC
GCTAAAAAGA TTACCAAAGA AAGCCTAAAA AACAAAGAAT ACAAGTGGGG CCATTCAACC
CATAGAGGTT TCTTCATTGG CATGAAACTT ACTCTTGCAC TTGATTCTCA AACATTAAAA
CCTTTAGCGT TTCTGATTAA TGAAGCAAAT GTAGCAGAAC CTAAAATTTA TCCTGAAATA
CTTAAAGAAC TTAAAAGAAA GAGAATAATA AAAGCAGGTG ACGTTATCTA TGCTGATAGA
GGGTACTATT CCTATGAAAA CTACGTTATA TCTGTAAGAA ATTTTAAGGT AGTACCTTTA
ATTATTCCAA GGAAAAACTG TAATTTTAAG AAACTTTTCA ATATGTTTAG ATATCCTCTG
AAAATATTTG ATTTAAGAAG AAATACTGAA AAAGAAATTA AATTCTACAA AGAAATAATT
GCAAAGTTTA AAGAGTTAAT AAGCAAATGG AAAGAACTCA GATCTGTAAG GTCAATTATA
GAAGATGTAT TCAAAATAGC GAAGAAAGCA TACTCTATGG AGAATTTACA CAGATATACA
AGGAGTTCTG TCCAAAAATA CTGTTCTTTA GCTGTACTTT TAGTAGGGGC AACTGTAAAT
TACGGTATTA ATGAAAGGAA GGAATTGCAA GCCTTCTCTG AATGA
 
Protein sequence
MIITKPPLIP LNEDFKWQLL SEILNVFDLR FCKQTLTRRG IVPLHRSVPT IKIVLLSMFF 
SCEISYAIKE LKEREILRNF LKISLVPTEK EVYGILSKYE PQEFTAFVFE ILNDLCPKRK
NGSRDIIIDS TDINLNLNWH AKKITKESLK NKEYKWGHST HRGFFIGMKL TLALDSQTLK
PLAFLINEAN VAEPKIYPEI LKELKRKRII KAGDVIYADR GYYSYENYVI SVRNFKVVPL
IIPRKNCNFK KLFNMFRYPL KIFDLRRNTE KEIKFYKEII AKFKELISKW KELRSVRSII
EDVFKIAKKA YSMENLHRYT RSSVQKYCSL AVLLVGATVN YGINERKELQ AFSE