Gene Mbar_A3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3287 
Symbol 
ID3627897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4225517 
End bp4226338 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content49% 
IMG OID637702123 
Productnitroreductase 
Protein accessionYP_306748 
Protein GI73670733 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.954102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCTC ACCTTATCGT TGATCAGGAT CGCTGCACAG GATGCGGCCT TTGTGTAAAG 
ATGTGCTCCT CAGGTATTAT TATTCTGGAT GATAAGTCAA ATCTTCCTCA GGTGCAGGAA
GAAAACATTT CTCACTGTCT CTATTGCGGG CACTGCGAGG TATTTTGCCC GTCTCAGGCA
CTTACCCTAA ATTTCCTACC TGATGAAAAA GTTCCCCTGC CTGCCGGTGC TGGCAATATC
TCTCCGGAGG ATATAGCCTT CTATCTCAAA AAACGCAGGT CTATCCGGCA TTTTACCAAG
GAACCCGTGC CAAAGGAGAA AATCCTTGAA GTCCTCGATA TTGCCCGTTA TGCAGCATCT
GGAGGTAACG GTCAGCCGGT GCAGTGGCTG ATAATCCATG ATCCCGAAGA AGTAAAGAAG
ATTGCCGGGC TAACTATCGA ATGGATGAAA AACCTGCTGA ACACCGACCA CCCTATGAGC
GGGTTTGTGC CGATGCTTAT TTCTGCATGG GAGCAGGGAA TTGATGTCAT CTGTAGGGGC
GCTCCACACC TGCTTTTCGC CCACATTCCA GAGGACAACC ATATTGCTTC TACTGATGCT
ATCATCGCCC TCACCCATTT CGATATCGCT GCACCGGCGT TCGGGATCGG GACATGCTGG
GCGGGATTCG TTGCAGCTGC TGCCATGTCC TATGAACCTC TTAAGAAAGA ACTCGACTTG
CCCGCAGGAC GAAAGTCTGC TTACGCAATG ATGTTTGGCA ATCCGGAATA CAAGGTTTAT
GGAATCCCCC GCAGGAAGCC TCTTGAGGTT ATGTGGAAGT AA
 
Protein sequence
MMSHLIVDQD RCTGCGLCVK MCSSGIIILD DKSNLPQVQE ENISHCLYCG HCEVFCPSQA 
LTLNFLPDEK VPLPAGAGNI SPEDIAFYLK KRRSIRHFTK EPVPKEKILE VLDIARYAAS
GGNGQPVQWL IIHDPEEVKK IAGLTIEWMK NLLNTDHPMS GFVPMLISAW EQGIDVICRG
APHLLFAHIP EDNHIASTDA IIALTHFDIA APAFGIGTCW AGFVAAAAMS YEPLKKELDL
PAGRKSAYAM MFGNPEYKVY GIPRRKPLEV MWK