| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3260 |
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| Symbol | |
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| ID | 3627811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4185493 |
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| End bp | 4186284 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637702096 |
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| Product | 23S RNA methyltransferase J |
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| Protein accession | YP_306721 |
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| Protein GI | 73670706 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0293] 23S rRNA methylase
[COG3269] Predicted RNA-binding protein, contains TRAM domain |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0985526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.474251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAG ACAGAAGAGA TTACTATTAT CGTCAGGCAA AAGAGGAAGG GTACCGATCA
AGGGCTTCCT TCAAACTAAA GCAGATTAAC GAAAGACATC ATATTATCAA TCGAGGAGAC
TCGGTTGTTG ATCTGGGTGC AGCCCCGGGC GGTTGGCTCC AGGTTGCAAA GGAACTGTCC
GGAGGTAAGG TTCTTGGTGT GGATCTTCAG AGAATTGTGC CTATAGAGGG TGTCGAGACC
ATTCAGGGCA ATATAAACGC AGATTCAACC ATACAGAAAA TTATTAAGAC CGTAGGGGCA
AAAGGAGCTG ATGTAGTACT TTGTGATGCA GCCCCTAACC TGTCAGGAAA CTGGTCTTAT
GACCATGCAA GGTCAATCGA GCTTGCAACT TCAGCTCTGG AATGTGCAAA AAAAATTCTC
AAGCCCAAAG GGAATTTCGT TGTTAAGGTT TTCCAGGGAG ACATGTTTAA CGATTACATG
CAGAAGGTAA GGGATAACTT TGTCCGTACA ATGGCTTATT CTCCAAAAGC CTCGCGGTCC
CAGAGTGCTG AAATCTACGT TATCGGAAAG AAATTCCTTA CAGCTCCGCT CCGCAAAGGA
GACAAATTCG TTGTGGATAT CGAAAAACTA GGCTCAAGTG GGGACGGCGC CGTGCTCATT
GAAGGGTTTG TTGTCTTCGT AAAGGAAGTC GAGGTCGGAG AAAAGGTCAG GATTAAAATA
ACGGATGTCA AGCCAAACTT TGCTTTTGCC GATGTCGCAG AAAGGCTTGG AAAAACCGAA
AAACCTGAGT AA
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| Protein sequence | MARDRRDYYY RQAKEEGYRS RASFKLKQIN ERHHIINRGD SVVDLGAAPG GWLQVAKELS
GGKVLGVDLQ RIVPIEGVET IQGNINADST IQKIIKTVGA KGADVVLCDA APNLSGNWSY
DHARSIELAT SALECAKKIL KPKGNFVVKV FQGDMFNDYM QKVRDNFVRT MAYSPKASRS
QSAEIYVIGK KFLTAPLRKG DKFVVDIEKL GSSGDGAVLI EGFVVFVKEV EVGEKVRIKI
TDVKPNFAFA DVAERLGKTE KPE
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