| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3250 |
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| Symbol | |
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| ID | 3627727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4169579 |
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| End bp | 4172638 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637702086 |
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| Product | sensory transduction histidine kinase |
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| Protein accession | YP_306711 |
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| Protein GI | 73670696 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.145129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA GTTTGAGAAA TTCTGGAATT GACATTATTG GAGAAGTGCC CTGGGGAACG
CATTTCTGTC AATTTTACCA GACAAAACAG GATTTAATTG ACATACTTGT TCCTTATTTT
AAAGCCGGTC TGGAAAATAA CGAATTCTGT ATGTGGGTTA CATCAGAGCC CCTGGAAGTC
GAAGAGGCAA AAGGCGCTCT TAGAAAAGCT ATTCCTGAGA TTGATGTTTA TCTGGAAAAA
GGACAAATTG AAATTATTCC TTACACTTAC TGGTATGTCA AAGAGGGAAT TTTTGATTCG
CAAAAAGTGC TTAACGGCTG GATAGAAAAA CTCAATCGAG CTCTGGCTGA CGGTTACGAC
GGTTTAAGGT TGAGCGGAAA CACCTTCTGG CTGGAGAAGA ATGACTGGAA CAGTTTTGTT
GATTATGAAA AAGAAATCGA CAGCATCATC GGCAACTATT CCATGATAGC CCTGTGCACA
TATTGCCTTG AGAGGTGCAG TGCAACCGAA ATTATTGATG TAGTTATCAA CCATCAATTT
GCCCTGGTTA AAAAAGAAGA GAAATGGACA CAAATCGAGA GTTCCAGACG CAAAAAGGAA
AAAGAGAAAG CTTTTCAAGT CACACAATAC TGGGGATCCA CCTTTGATTC CATGCCAGAC
CTGATAGCCA TACTCGACGA TAAATACCGG ATTGTTCGTG CAAACAAGGC AATGGCGGCA
AGATTAGGGC TGAAACCGGA AGAGTGTATA GGGTTAATCT GCTATCGGGC TTTGCACGGG
ACAGCTAGTC CTCCTTCTTT TTGTCCGCAC AGGCTTTTGA TTGAGGACGG GCTTGAACAT
ACTACAGAGA TTTTTGAGGA ATGCCTGGGT GGTTATTTTA TATTAAGTGT CTCGCCACTC
TATAATTCCA AAGGGAAAAT TATTGGGAGT GTGCATGTTG CTCGTGATAT TAACGAACGC
AAAAAGGCTG AAAAAGATCT GAAAAAGAGT GAAAACGAAT TCCGCACACT GGCAGAAAAT
TCTCCTGACA TAATTGCCCG ATTTGATAGA AAAAATCGCC ATATGTATGT AAATCCTGCC
GCTGCCGAAG TCTATGGTTG TTCTCAGGAC GAAATCATCG GGAAAACTCA TTGTGAACTG
GGAAGAGACC CTGAACAGAT AGAGCTCTGG GAAAAACATC ATCAGAATGT TTTTGCTACA
GGAAAATCGG GGACAATGGA ATTCCAGTAT AGATCGCCTC AAGGAAAAGA ATACTATTTT
AACACAAGAA TAGTACCTGA ATTTGTTAAT GGCAAAGTGA CTTCCGTCCT TGCTATTTCC
CGTGATATTA TCGAAATAAA AAAAGCTGAA GCCAGGTTAA AAGAAACCCT TGATAATTTA
GAAGAGTTAG TTAAAGAAAG GACATCGGAA GTTGAAAAGG CTTGTAATTC TTTGAAAGAA
AGCAAAAGGA GTCTTTCTGA AGCTCAAAGG ATGGCACACC TTGGAAACTG GGACTGGAAC
ATTATAACTA ATGAATTATA CTGGTCTGAT GAAATTTATT GCATCTTTGA ACGCAGCCCT
CAAGAGTTCG GGACAACTTT CGATGCATTT CTGAATTATG TACATCCAGA CGATCGAGAT
TATGTAAATA AGGCTGTTAA AGAAGCTTTA AACGGAAAAA AATACAGTAT TAATCACCGT
ATTACTTTAG TCAGTGGAGA AGAGCGTATT GTACATGAAC AGGCTGAGGT TATTTTTAAT
GAAGAAAATA CCCCTATCCA TATGAGAGGA ACAGTCCAGA ACATTACTGA GCAAAAAAAA
GCTGAAGAAG CCTTAAAACT GGTTAACTCA TATAACCGCA GTCTTATTGA GGCCAGCATA
GATCCTTTTG TAACTATTGA TCTGGATGGT AAAATTACTG ATGTGAATAA CTCAACAGAA
TCTGTTATAG GTTATTCTCG TGATGAATTA ATTGGGACTG ATTTTTCGGA TTATTTCACC
GAATCTGAGA AAGCTAGAGA AGCATATCAG TATGTGTTCC AGAAAGGACT GGTGCAAAAT
TATCCTCTGG AAATTCGGCA TAAAAATGGA AATATAACGC CGGTTTTGTA CAATGCTTCG
GTTTACAGGG ATGAAGCTGG AGAAGTTATC GGCATCTTTG CTGCAGCACG AGATATCTCA
GAGCAAAAAA TGGCTGAGGA GGCTTTGAGA TTATCAAATA TTTATAACCG TAGCCTTATT
GAAGCCAGTA TGGACCCGCT GGTTACTATT GGGCCTGACG GAAAGATAAC TGATTTGAAT
AAGGCTACAG AACTGATTAC CGGTTATTCC AGAAATGAGT TGACCGGAAC TGATTTTTCG
GATTATTTTA CTGAGCCTGA AAAAGCGAGT ACAGGATATC GGCAGGCGTT TGTAAAAGGT
GAAGTCCGGG ATTATCTTCT TGAAATTCAG CACAGAAATG GTCAGGTAAC TCCTGTTTTG
TATAATGCTT CGATTTATAA AGACGAAAAT GGTGAGGTTA TTGGAGTTTT TGCAGCTGCT
CGTGACATCA CCGAACGGAA AAAGGCAGAA GAGATGCTAA AACTGAAATT AGAGGAGCTT
GCTCGCTCAA ACGCGGAGCT GGAACAATTT GCCTACGTAT CATCCCACGA CTTGCAAGAA
CCCTTGAGAA TGATAGCAAG TTATTTACAG CTTTTACAAA GAAAATATCA GGGAAAGCTT
GACGAGAGGG CTGATAAATA CATCTATTTT GCTGTGGATG GGGCGTCCCG CATGCAAAAC
CTGATAAACG ATCTTCTGGA ATTTTCTCGA GTAACTACAA GAGCCAGAGA ATTCGAGCCT
ATTGATTGCA AATCTGTTCT GGATCGTGTG TTATTTGATT TAGATGTATC TATAAAAGAA
AATGAAGCCA GTATCTCTTC TGGTTCTTTA CCTGTAGTAA TGGCAGACCC TGTCCAGTTT
ACTCAGCTCT TTCAGAATCT TATAAGCAAC GCTATAAAAT TCCGCAGTGA AAATGCCCCG
AAAATTGAAA TTTCTGCCGA AAAACAGGCT GATCAATGGT TATTTTTCAG TAAAAGATAA
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| Protein sequence | MEKSLRNSGI DIIGEVPWGT HFCQFYQTKQ DLIDILVPYF KAGLENNEFC MWVTSEPLEV
EEAKGALRKA IPEIDVYLEK GQIEIIPYTY WYVKEGIFDS QKVLNGWIEK LNRALADGYD
GLRLSGNTFW LEKNDWNSFV DYEKEIDSII GNYSMIALCT YCLERCSATE IIDVVINHQF
ALVKKEEKWT QIESSRRKKE KEKAFQVTQY WGSTFDSMPD LIAILDDKYR IVRANKAMAA
RLGLKPEECI GLICYRALHG TASPPSFCPH RLLIEDGLEH TTEIFEECLG GYFILSVSPL
YNSKGKIIGS VHVARDINER KKAEKDLKKS ENEFRTLAEN SPDIIARFDR KNRHMYVNPA
AAEVYGCSQD EIIGKTHCEL GRDPEQIELW EKHHQNVFAT GKSGTMEFQY RSPQGKEYYF
NTRIVPEFVN GKVTSVLAIS RDIIEIKKAE ARLKETLDNL EELVKERTSE VEKACNSLKE
SKRSLSEAQR MAHLGNWDWN IITNELYWSD EIYCIFERSP QEFGTTFDAF LNYVHPDDRD
YVNKAVKEAL NGKKYSINHR ITLVSGEERI VHEQAEVIFN EENTPIHMRG TVQNITEQKK
AEEALKLVNS YNRSLIEASI DPFVTIDLDG KITDVNNSTE SVIGYSRDEL IGTDFSDYFT
ESEKAREAYQ YVFQKGLVQN YPLEIRHKNG NITPVLYNAS VYRDEAGEVI GIFAAARDIS
EQKMAEEALR LSNIYNRSLI EASMDPLVTI GPDGKITDLN KATELITGYS RNELTGTDFS
DYFTEPEKAS TGYRQAFVKG EVRDYLLEIQ HRNGQVTPVL YNASIYKDEN GEVIGVFAAA
RDITERKKAE EMLKLKLEEL ARSNAELEQF AYVSSHDLQE PLRMIASYLQ LLQRKYQGKL
DERADKYIYF AVDGASRMQN LINDLLEFSR VTTRAREFEP IDCKSVLDRV LFDLDVSIKE
NEASISSGSL PVVMADPVQF TQLFQNLISN AIKFRSENAP KIEISAEKQA DQWLFFSKR
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