| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3234 |
|---|
| Symbol | ksgA |
|---|
| ID | 3627351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4151890 |
|---|
| End bp | 4152753 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637702071 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_306696 |
|---|
| Protein GI | 73670681 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0690544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0840348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCAA TTTATTCAGG AGGTTTCAGT CTGGTTCGTT CTCTTCTTAA AAAATATAAT
ATAAAAGGAG GCACTTTTGA TCAGCATTTT CTGGTCGATG CAGGCTATCT AGACAGAATA
GTAGCTGCTG CTGAGCTTGG GCCTAAGGAT GTAGTTCTTG AAATCGGTGC AGGTGTCGGA
AACCTGACTG AAAGGCTTGC AAAAAAGGTA AAAAAAGTAA TTGCAATTGA ACTCGACCCT
GTCCTTGTCA GAGTTCTCCA TGACCGTTTC GATAAAGTAG GAAATATTGA GATTATCGCC
GGAGATGCCC TGAAAGTCGA GTTTCCGGAA TTCGATAAGA TCGTCTCAAA TCTTCCCTAT
TCTATCTCTT CTGAGATAAC TTTCAAGCTC CTTCGCCATA AATTCAAACT TGGCATTCTC
ATGTACCAGT ACGAGTTTGC AGCTCGGATG GTTTCCCAGC CTAACTGCAA AGATTATTCA
CGCCTTACGG TTGATACCTG CTATTTTGCC GACGCTTCTA TTTTGATGAA GGTCCCAAAA
AGCGCGTTTC AGCCGGCACC TGAGGTTGAT TCTGCAGTTA TTAAACTCGT TCCCCGCCCA
GTACCTTTCG AAGTCAAAGA CCAGGCTTTT TTCATGAATT TTGTTTCTGC AGTCTTCAGC
CAGCGTCGGA AAAAATTGAG AAATGCGATC CTGAACACAA ATTATCTACT CAAAATTCCC
AACATTAAAG AGGTGATTTC CCGGCTCCCT GAGGATATGA TGAGTAAGCG CGCTGAAAAC
CTGACTCCTG AAGAGCTTGC ACAGGTTGCA AATCATATAA TTGATTTAAA GACGTCAATT
CTTGCAAATG AATTAAATGA ATAA
|
|---|
| Protein sequence | MYSIYSGGFS LVRSLLKKYN IKGGTFDQHF LVDAGYLDRI VAAAELGPKD VVLEIGAGVG
NLTERLAKKV KKVIAIELDP VLVRVLHDRF DKVGNIEIIA GDALKVEFPE FDKIVSNLPY
SISSEITFKL LRHKFKLGIL MYQYEFAARM VSQPNCKDYS RLTVDTCYFA DASILMKVPK
SAFQPAPEVD SAVIKLVPRP VPFEVKDQAF FMNFVSAVFS QRRKKLRNAI LNTNYLLKIP
NIKEVISRLP EDMMSKRAEN LTPEELAQVA NHIIDLKTSI LANELNE
|
|---|
| |