Gene Mbar_A3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3231 
Symbol 
ID3627348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4149325 
End bp4149618 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content46% 
IMG OID637702068 
Product50S ribosomal protein L21e 
Protein accessionYP_306693 
Protein GI73670678 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000418064 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0776231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACT CCCACGGCGA AAAACGCTGC ACAAGGTACA AATTACAGAA GACAGTTCGT 
GAAAGAGGGA TTTCCCCTGT AAGCAAGGCA ATTCAGGAAT TCGAAGAAGG GCAAATGGTT
CATATTGACA TTGACCCGAG CATTCAGAAA GGCATGCCTA ATCCAAAATT CCAAGGTTCT
ACCGGAAAGA TTGTAGGACA GCGCGGTCGT TCGTACATTC TTGAAGTCCG CAGCGGAAAT
GCGATGAAGG AAGTTATCTC TCTCCCTCAG CACCTTAAAC CGCAGAAGTA TTAA
 
Protein sequence
MTNSHGEKRC TRYKLQKTVR ERGISPVSKA IQEFEEGQMV HIDIDPSIQK GMPNPKFQGS 
TGKIVGQRGR SYILEVRSGN AMKEVISLPQ HLKPQKY