Gene Mbar_A3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3229 
Symbol 
ID3627346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4147096 
End bp4147731 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content48% 
IMG OID637702066 
Producthypothetical protein 
Protein accessionYP_306691 
Protein GI73670676 
COG category[S] Function unknown 
COG ID[COG1901] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000502715 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0487797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATA TCGTTATTAT AGGGCATAAA GCATATACAA GCGGCGACTT TACATTAAAT 
GATCTTCCAG GTTCTGCGGG AAGAATGGAT ATCCTTTGCC GTTGCGTGAG TTCTGCCCTT
TTTCTCTCTT TCGGAATGCG CAGGGACGTA AATGTACACC TGCTCCTTCT GGGAGAACCT
GATCCCGGAA AAATCATAAG GTTTGAAGGA CTGCACCTGA GATACCTTAA CCCGGACGAG
CGGAGCAGTG GTTCACTTAT CCAAAAAGCC CTTCAGAAGA ACGCAAACGA ACAGGATATC
CGTTCCACTC CAGGTGTCTG GATTCGCCGA GGAGATCTAG ATTCCCTGCT CTCAAAATTC
GAGGGCCGCA CTCTGCTCTA CCTGAGAGAA GATGGAGAGG ATATCAGAGC AATTGCAAAT
GAAATCCGCG ATCCGGTCTT CATCCTTGGA GACCATTTAG GAGTTACTGA AGAAGAGGAA
GCACAGCTCC TTAAGGCAGG GGCGAAAATT ATCTCGGTAG GTCCTCTTTC CCTCCATTCT
AATCACTGCA TAACCCTTAT ACACAATGAA CTGGACAGGG CTGAGGCTGA AAGGGGAGAG
TTTCCCGGAG AAGCTGACAG CAGGGTCGAA GATTGA
 
Protein sequence
MRDIVIIGHK AYTSGDFTLN DLPGSAGRMD ILCRCVSSAL FLSFGMRRDV NVHLLLLGEP 
DPGKIIRFEG LHLRYLNPDE RSSGSLIQKA LQKNANEQDI RSTPGVWIRR GDLDSLLSKF
EGRTLLYLRE DGEDIRAIAN EIRDPVFILG DHLGVTEEEE AQLLKAGAKI ISVGPLSLHS
NHCITLIHNE LDRAEAERGE FPGEADSRVE D