Gene Mbar_A3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3228 
Symbol 
ID3627345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4146158 
End bp4146817 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID637702065 
Producthypothetical protein 
Protein accessionYP_306690 
Protein GI73670675 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00856854 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0495142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAC TGGCTATTTC TGACCCCCAT GGAGATTATT CGAAGATAGC GGAAATGATT 
GAAAAGGCAG GGGATTTTGA CCTTGTAGTC ATTGTTGGGG ACATTACCAA TTTTGGGCCC
GATGAGAAGG TTGAAGAATT GATGGAAATG TTTGACAAAC CTGTACTTGC GATCCCAGGA
AATTGCGACT ATAAGAGCAT CTTAAAAGCC CTTGACGCTT CTAAGGCTAC TAACTTGCAC
GGAAAAGCCG AACAGATAGG AAATATCAGG TTTATAGGTC TGGGAGGCTC AAATCCCACC
CCTTTCAATT CGCCCTTTGA GTTATCCGAA GAAGAAATTG AAAATGTCCT TGAAGGAATG
GTCTGCTCTG CCGAAAATGA CAAAGATTGC GGCACCATAG TACTTCTGAC ACATGCCCCG
CCTTACGGTG CAAGGGATGA ACTTCCTTTA GGACACGTGG GCAGCAAGGC TATCCAGAAA
TACCTTGACC GGGTTGACCT TATCGTCTGC GGGCACATCC ATGAGGCAAA AGGTCTGGAG
CAGGTTGGAA AGACTGTAGT GGTAAACCCT GGTGAAGCCT GTAAAGGTTC TTGCACACTG
ATAACTCTCG GAGAAAAGGA GGAAAACAAA CCTATTGAGG TTGAATTTAT AGAGGTGTAA
 
Protein sequence
MKILAISDPH GDYSKIAEMI EKAGDFDLVV IVGDITNFGP DEKVEELMEM FDKPVLAIPG 
NCDYKSILKA LDASKATNLH GKAEQIGNIR FIGLGGSNPT PFNSPFELSE EEIENVLEGM
VCSAENDKDC GTIVLLTHAP PYGARDELPL GHVGSKAIQK YLDRVDLIVC GHIHEAKGLE
QVGKTVVVNP GEACKGSCTL ITLGEKEENK PIEVEFIEV