Gene Mbar_A3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3205 
Symbol 
ID3627108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4120339 
End bp4121583 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content46% 
IMG OID637702044 
Producthypothetical protein 
Protein accessionYP_306669 
Protein GI73670654 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.168746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0109515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGATT CAAAGGCTTC AAGAAGAAGA GAGGCAGCTT CAATAATTGC TGTTTTATGC 
ATATTCCTCG TACTCGCCGC ATTCACTGGA GTTCTGTCTT CGGATTCGAT TGAGAATTTC
AGAGAAGAAG TAACAGGTTA TATCTCTTCA GAACTGGATC CCGAAAGCCA GGAGAGTGTT
TTTACACCTC AACCGGCTTT ATTTACTTTC CCGGCAACAC CCACATACTC CCCCAGGAAA
AGCGAACTCA CTCCCATCCT GAGAACTCTG TTGCAGCCTG GCTTCTCCCT GAGCAGCAAC
TACCAGACTT CAGATTTTTT CCAGGGGGGA ATGGGCTATG TTAGAATCAA TATCAAAAAT
GAAGGTCGAA ACTCAATTTT TATAGATAGA TACGGGGTTT CGGTTAATGC CTCTGAAAGC
CGGATTTATT CTGAGGACTG CGGAGTTTTG GTCAATCCTG GCGAAGAGCA GTATCTTGGA
GTAATCGCGA TTCAGATTCC TGAGGAAAAA AAAGCCAATT TCAGTATTGT CCTCTGGCTG
CTTGCCTCGA CCTCGGAAGG AAAATGGCAC GACTACGGAC CTTATCCTCT GAAAAACTTT
ACTGTAAACC TGAAGCCAAT GACAGAAAAA TCAAAGCTAG TATACCGACA CAATCCTTCG
CCTTACTTTG AGACCATAAA TAAACTTGTG GAGCCAGCCG AACCGACTAT AAGGGAAAAG
GCAGTCCAGG TGGCTCGCGC ATATCCTGGA GCATATAATA TGTATCAGGT CTGTGCCCTC
TTTGACATGG TAAAAGAAAA GGTCGAATAC GTAAGTGACC CAAGAGGTAA TGACATCTGG
GAGCCAGCCA ATGTTACTCT GAAAATAGGA GCCGGGGATT GTGAAGACCA GGCAATTCTC
CTTTCATCCA TGCTCGAGGC TGTAGGAGGC ACAACCCGGG TCTACCTGAC CAATACGCAT
GCCTTTGCAG CGGTATATAT AGGCAATGGA ACCGATTCGA CAGATGCTGC AGTCAAAGGA
GTGCGAGCTT ATTACGGAAA CGTTGATGTA AATTACCTGA CCGATGAATA CGGTTCCTGG
CTGATGCTCG ACCCTACCTC GAGTCTTTAT GCAGGTGGGC TTCCCGGAAA AACGGCCCAG
GCAAGAGTTA AAGCTGCTGA AGGAAACGAA ACATATAGAA GCTGGACCTT TGTAGACACA
AACGAAGTAA AAGCTATTGA TATCAACCCC AGGTGGTCCT TATAA
 
Protein sequence
MRDSKASRRR EAASIIAVLC IFLVLAAFTG VLSSDSIENF REEVTGYISS ELDPESQESV 
FTPQPALFTF PATPTYSPRK SELTPILRTL LQPGFSLSSN YQTSDFFQGG MGYVRINIKN
EGRNSIFIDR YGVSVNASES RIYSEDCGVL VNPGEEQYLG VIAIQIPEEK KANFSIVLWL
LASTSEGKWH DYGPYPLKNF TVNLKPMTEK SKLVYRHNPS PYFETINKLV EPAEPTIREK
AVQVARAYPG AYNMYQVCAL FDMVKEKVEY VSDPRGNDIW EPANVTLKIG AGDCEDQAIL
LSSMLEAVGG TTRVYLTNTH AFAAVYIGNG TDSTDAAVKG VRAYYGNVDV NYLTDEYGSW
LMLDPTSSLY AGGLPGKTAQ ARVKAAEGNE TYRSWTFVDT NEVKAIDINP RWSL