| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3196 |
|---|
| Symbol | |
|---|
| ID | 3627138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4110486 |
|---|
| End bp | 4111292 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637702035 |
|---|
| Product | serine/threonine specific protein phosphatase |
|---|
| Protein accession | YP_306660 |
|---|
| Protein GI | 73670645 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.590579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00854387 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCAG GAAAGGTCTC CAGGAAAATT GCCGCAAAGG AAGAACTGCT TCTTATTCTC
CCGAAAATAG ACAGAGTTTT GGAGTCAGAA CCTGCCGTGC TTCGAATTGA CGCCGAACCT
ATAATGATTA TTGGGGATAT TCACGGGGAC CTTCAGGCCC TTGAATTCAT AATAGAAAAA
AGGCAAGAAA TAAACTGTAA GAATATTCTT TTTCTCGGAG ATTACGTGGA CAGAGGACCT
CAAGGTGTCG AAGTACTTAC AAGAGTTTTT CGACTGAAGC TTGAAGAGCC TGAGCACATA
TTCTTACTCA GGGGAAATCA CGAAACTGTG GATATGAACC TCTACTATGG CTTTTTTGAG
GAAATCGGTT TCGATCAGGG TTTTCTTCTA AGGACAAGCC GGACATATGA TAAAATGCCG
ATAGCAGCTG TACTTTCGGA GCATACATTT TGCGTACACG GCGGGATTAA CGGAACCGGC
AGCATTGACG ACATCAGGAA GGAAGAAGCC TTTGCTTTTC CTTATCTCTG GAATGATCCT
TCGAAACACC CTGGACTCAC CGCTTCAACC CGAGGCTCGA CTGTAAAAGA GTTCGGGCCA
GATATTGTAG ATGGCTTTTT ACAGACAAAT AACCTGAAAA GGATTATAAG AGGCCATACA
GCCCTTGAAA ATGGGTACAG ATGGTGGTTT GATGGGAAAT TGCTCTCTCT ATTTTCCTGC
CCTGACTATG TTGGACTAGG GAATGCGGCG GCTTTTGCGC TATTTGAAAA AGAAGAGATT
AAACTTTTCG TCTTTGGAAA GCAGTAG
|
|---|
| Protein sequence | MVSGKVSRKI AAKEELLLIL PKIDRVLESE PAVLRIDAEP IMIIGDIHGD LQALEFIIEK
RQEINCKNIL FLGDYVDRGP QGVEVLTRVF RLKLEEPEHI FLLRGNHETV DMNLYYGFFE
EIGFDQGFLL RTSRTYDKMP IAAVLSEHTF CVHGGINGTG SIDDIRKEEA FAFPYLWNDP
SKHPGLTAST RGSTVKEFGP DIVDGFLQTN NLKRIIRGHT ALENGYRWWF DGKLLSLFSC
PDYVGLGNAA AFALFEKEEI KLFVFGKQ
|
|---|
| |