Gene Mbar_A3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3193 
Symbol 
ID3627135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4107435 
End bp4108160 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content43% 
IMG OID637702032 
Producthypothetical protein 
Protein accessionYP_306657 
Protein GI73670642 
COG category[S] Function unknown 
COG ID[COG2454] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0089473 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGATA CGTATGTAAG TTCAGCCGAT CTTTCCGATT CCTGTCCGAA AGAGGAATTA 
CTCAAAGAAA AATTACTCAA ACCTGCGCGG GATATCCGGA ACATACTCCG GTGGGGCTAT
CCAAAGTTTT CGACCATCCG TTTCGTAGCT GACCACTTCC AGCTCAGCCT GGAAGAACGA
TACATTCTCA CAAGAGTAAT CATGCCTCCG GACAGGATAG TTTCCAGAAT AAATAAAAAA
GTGGCATGTA CAGGCATAAA AGGTAGGTAT CTTCTCCTTG ATGGTTACAA TGTCCTGCTG
AGTGTGGACA GCCTGCTAAA AAAAGAACCC ATGTGGTTCT GTGATGACGG GTACATAAGA
GATACTCGCT ACTATTTTAG CAAAGCAAAA CAGGCCGAAG ATATAGAGGA AGCTCTCAAT
GTAGTCCTCA AGTTTCTTTC CGAAACAGGT CCAAAATCAG TCATTTTTCT CCTTGACGCC
CAGATCAGCA AAAGCGGGGA GCTTGCAGGC TTCATTCGCC ATAAAATGAA AGAATACGGA
ATTTCAGGCG AGGCAAGAAC CTCAAAAATC GCGGACTTTG AGCTGAAAAC GGAGGGAGGA
AATCCAGAAA AAAAGATAGT TTTGGCAACT TCTGATGGAA TTATTATAGA TTCGATCCGT
GAGGTACTTG ATATCACTGC CTGCCTGATG GAAATAATGG AAGTTGAACC GATCAGGCTA
TATTAA
 
Protein sequence
MRDTYVSSAD LSDSCPKEEL LKEKLLKPAR DIRNILRWGY PKFSTIRFVA DHFQLSLEER 
YILTRVIMPP DRIVSRINKK VACTGIKGRY LLLDGYNVLL SVDSLLKKEP MWFCDDGYIR
DTRYYFSKAK QAEDIEEALN VVLKFLSETG PKSVIFLLDA QISKSGELAG FIRHKMKEYG
ISGEARTSKI ADFELKTEGG NPEKKIVLAT SDGIIIDSIR EVLDITACLM EIMEVEPIRL
Y