Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3193 |
Symbol | |
ID | 3627135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4107435 |
End bp | 4108160 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637702032 |
Product | hypothetical protein |
Protein accession | YP_306657 |
Protein GI | 73670642 |
COG category | [S] Function unknown |
COG ID | [COG2454] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0089473 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAGATA CGTATGTAAG TTCAGCCGAT CTTTCCGATT CCTGTCCGAA AGAGGAATTA CTCAAAGAAA AATTACTCAA ACCTGCGCGG GATATCCGGA ACATACTCCG GTGGGGCTAT CCAAAGTTTT CGACCATCCG TTTCGTAGCT GACCACTTCC AGCTCAGCCT GGAAGAACGA TACATTCTCA CAAGAGTAAT CATGCCTCCG GACAGGATAG TTTCCAGAAT AAATAAAAAA GTGGCATGTA CAGGCATAAA AGGTAGGTAT CTTCTCCTTG ATGGTTACAA TGTCCTGCTG AGTGTGGACA GCCTGCTAAA AAAAGAACCC ATGTGGTTCT GTGATGACGG GTACATAAGA GATACTCGCT ACTATTTTAG CAAAGCAAAA CAGGCCGAAG ATATAGAGGA AGCTCTCAAT GTAGTCCTCA AGTTTCTTTC CGAAACAGGT CCAAAATCAG TCATTTTTCT CCTTGACGCC CAGATCAGCA AAAGCGGGGA GCTTGCAGGC TTCATTCGCC ATAAAATGAA AGAATACGGA ATTTCAGGCG AGGCAAGAAC CTCAAAAATC GCGGACTTTG AGCTGAAAAC GGAGGGAGGA AATCCAGAAA AAAAGATAGT TTTGGCAACT TCTGATGGAA TTATTATAGA TTCGATCCGT GAGGTACTTG ATATCACTGC CTGCCTGATG GAAATAATGG AAGTTGAACC GATCAGGCTA TATTAA
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Protein sequence | MRDTYVSSAD LSDSCPKEEL LKEKLLKPAR DIRNILRWGY PKFSTIRFVA DHFQLSLEER YILTRVIMPP DRIVSRINKK VACTGIKGRY LLLDGYNVLL SVDSLLKKEP MWFCDDGYIR DTRYYFSKAK QAEDIEEALN VVLKFLSETG PKSVIFLLDA QISKSGELAG FIRHKMKEYG ISGEARTSKI ADFELKTEGG NPEKKIVLAT SDGIIIDSIR EVLDITACLM EIMEVEPIRL Y
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