| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3188 |
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| Symbol | |
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| ID | 3627130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4099508 |
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| End bp | 4101028 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637702027 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_306652 |
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| Protein GI | 73670637 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase
[TIGR03327] AMP phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0024826 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATTGA AGTTAGAACA TTTTAACATA AAAATAGGGC AGCACAAGAT ATTACTAAAT
ATTGCCGATG CAAAGGAACT GGGGGTTAAC CCAGGCGATA GGGTCCGTAT TCGTGGGCGT
GAAAGTATTT CTGCAATTGC GGATACAACG GATGATATGG TTCCTCCAGG CACGCTGGGC
GTTTTTTCCG AGGTATATGA GCACTTTGTG AACTGGGATA AACCGGTCGA AGTTGTTCCG
GCATTCCGTT CTAAATCCGC ATCCGTGATC AAGAAAATGA TGGATAAAAA ACCTGTTGTG
CAGGAAGAAA TTAAAACACT CGTAAACGAT ATAGTGGAAG AAAATCTCAG TGAAATCGAA
CTTTCGGCAT TTATAACATC TTCTTATATT CACGGAATGA CCGATGATGA GGTCGAATGG
CTTACAAGAG CTATGATTGA GAGCGGAGAC ACGATTGAGT TTGACACTCA TCCTATAATG
GACAAACACT CGATAGGAGG AGTGCCCGGA AACAAGATCT CCCTCCTTGT TGTTCCTATT
ATCGCTGCAA ACGGGCTTCT TATTCCGAAG ACGAGTTCAA GGGCGATTAC AGGGGCAGGT
GGAACTGCTG ACCTTATGGA AGTGCTCTGT CCGGTAGAGT TCAGTTCCCA AGAAGTCAAA
GAGATAACTG AAAAAGTCGG GGGCGCTCTT GTCTGGGGCG GAGCCACAAA TATAGCGCCT
GCCGATGACA AGCTCATAAG GGTTGAATAC CCTCTCTCCA TTGATCCTTA CTACCAGATG
CTCGCCTCGA TTATGGCAAA AAAAGGAGCT ATCGGGGCCG ACAATGTGGT AATGGACATT
CCGGTTGGGC CGAGCACAAA AGTTCCAACT GTTCAGGAAG GGCAAAAACT TGCAAGAGAC
CTGATTAACC TTGGGCACAG GCTTGGAATG AACGTTGAAT GTGCAATCAC CTATGGTTCG
TCTCCTATTG GAAGAAAAGT AGGACCTTCA CTGGAAGTCA GGGAAGCTCT GAAGGTACTG
GAAAGTATGG AAGGTCCGAA CAGCCTTATT GAAAAGAGTG CGGCTCTGGC AGGTATCCTG
CTTGAGATGG GGGGTGCGGC TCCAAGGGAC CGTGGAAAAG AGATTGCACT GGAAACACTA
AGGAGCGGAA AAGCCCTTGA GAAGATGAAA CAGATTATTG AAGCCCAGGG CGGTGATCCG
AAGATTACCT CGGCTGACAT CCAGGTAGGG CAATATACTG CCGATATTCT CGCTTCTGCG
GACGGATATG TCATCGAGTT TGACAATAAG TGGATAATTG AAATTGCCAG GCTGGCAGGA
GCTCCTAATG ATAAAGGAGC CGGGGTCGCT ATTCACAAGA AAATGGGAGA ATCCGTTAAG
AAGGGAGATC CTATCCTTAC GATCTATGCT GAAAAAGAGT TCAAACTAGA GACCGCATTG
GCAACAGCCC AGAGAACAAA CCCGATAGTT GTTGAGGGCA TGCTTCTTAA GAGAATTCCC
GGAACCTACG GGTTCCAGTA A
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| Protein sequence | MQLKLEHFNI KIGQHKILLN IADAKELGVN PGDRVRIRGR ESISAIADTT DDMVPPGTLG
VFSEVYEHFV NWDKPVEVVP AFRSKSASVI KKMMDKKPVV QEEIKTLVND IVEENLSEIE
LSAFITSSYI HGMTDDEVEW LTRAMIESGD TIEFDTHPIM DKHSIGGVPG NKISLLVVPI
IAANGLLIPK TSSRAITGAG GTADLMEVLC PVEFSSQEVK EITEKVGGAL VWGGATNIAP
ADDKLIRVEY PLSIDPYYQM LASIMAKKGA IGADNVVMDI PVGPSTKVPT VQEGQKLARD
LINLGHRLGM NVECAITYGS SPIGRKVGPS LEVREALKVL ESMEGPNSLI EKSAALAGIL
LEMGGAAPRD RGKEIALETL RSGKALEKMK QIIEAQGGDP KITSADIQVG QYTADILASA
DGYVIEFDNK WIIEIARLAG APNDKGAGVA IHKKMGESVK KGDPILTIYA EKEFKLETAL
ATAQRTNPIV VEGMLLKRIP GTYGFQ
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