Gene Mbar_A3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3161 
Symbol 
ID3626850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4072121 
End bp4072540 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content38% 
IMG OID637702000 
Producthypothetical protein 
Protein accessionYP_306625 
Protein GI73670610 
COG category[L] Replication, recombination and repair 
COG ID[COG3677] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.446465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00206023 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTGCC CAAGATGTAA TAGTTCCACT CACAAAAAGA ATGGTATAGT TTTTGGACGT 
CAACGCTACA AATGCCATGA TTGTGGATAT AACTATACCG TAGAGGTAAA ATCAACTTCT
ATCTCCCCTT CTGTTAAGAG ACAGGCTTTG CAACTCTATC TTGAAGGGTT AGGATTTCGC
TCAATAGGAC GATTTTTAGG GGTAAGTCAT GTTTCTGTCC AAAAATGGAT AAAGAAATTT
GGTCAGGAGT TAGAGGACCT AAAAAGTGAA AATGAGATAT CTATTGTTGA AATGGATGAG
ATGCACACTT ACATCGGTAA CAAAAAAAAT ATTGCTGGAT CTGGATTGCT GTTGATAGAG
TTGGGAAAAA ATTCATCAAC TGCTCTTTTG GGAACAGAGG AACGGAAACT GGACAACTAA
 
Protein sequence
MNCPRCNSST HKKNGIVFGR QRYKCHDCGY NYTVEVKSTS ISPSVKRQAL QLYLEGLGFR 
SIGRFLGVSH VSVQKWIKKF GQELEDLKSE NEISIVEMDE MHTYIGNKKN IAGSGLLLIE
LGKNSSTALL GTEERKLDN