| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3146 |
|---|
| Symbol | |
|---|
| ID | 3624382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4052907 |
|---|
| End bp | 4053395 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637701987 |
|---|
| Product | MarR family protein |
|---|
| Protein accession | YP_306612 |
|---|
| Protein GI | 73670597 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0129718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0536373 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA CTAATGAGAG GAGAGAAATG GGGCTATTGA TGCTGGAAAG GGAAGTACTT
TTTAACAAAT TGGTTGAAAG AAAATACTCT GAAATGATAT CCAAAGTCAG ATCGAAAGGA
CCCGAAAAGC TCGGCAGACA ACAGTCTAAT GCTATTCTGA TAATTGGCAC GATGGGGGAA
ATGATTCCTT CATACCTTGG TATGTGTATG AATATGGATA GGAGTAGCCT TTCAAGAATG
ATAGATTCCA TGGAAAAAAA AGGACTTGTC TATAGAAAGA CAGATCTTAA AGATAGAAGA
AAAGTTATGA TATATTTAAC CGAAAAAGGG GAAGAGTACT ATGAAATTCT TAAGGAGAAA
GCAGAAGAGA TTCAAGATTC TACAACGGAT CTTCTTAACG AACAGGATCT CAAAGAATAT
AAAGCCTGCA TAAAAACAGA GATAAGTATT CTGAAAAAAA TCGATTCCAA ACTAAATGCA
AAAGAATGA
|
|---|
| Protein sequence | MSDTNERREM GLLMLEREVL FNKLVERKYS EMISKVRSKG PEKLGRQQSN AILIIGTMGE
MIPSYLGMCM NMDRSSLSRM IDSMEKKGLV YRKTDLKDRR KVMIYLTEKG EEYYEILKEK
AEEIQDSTTD LLNEQDLKEY KACIKTEISI LKKIDSKLNA KE
|
|---|
| |