| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3125 |
|---|
| Symbol | |
|---|
| ID | 3626576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4020444 |
|---|
| End bp | 4020845 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637701963 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase |
|---|
| Protein accession | YP_306591 |
|---|
| Protein GI | 73670576 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATA TCTCAGTAAT TATGGGTTCC GAATCCGATA GGCCTATCGC CAACCGTGCG
ATATCCGTAC TTGAAAAGAG CAAATACACT TACGAAGTAA TGGTTATCTC TGCTCACAGG
AACCCTGAAG AACTTGAAAG CTACATATCA AGTACCGACG CAAAAGTCTT TATTACAATT
GCAGGTTTAT CTGCAGCCCT TCCTGGGGTT GTAGCTTCCA GAACAAAAAG ACCTGTAGTA
GGAGTCCCTG TAAGCGCGAA GCTTGGTGGA CTCGATGCCC TGCTCTCTAT TGCCCAGATG
CCCCCAGGAG TGCCTGTCGG AAGCGTAGGG ATCGATAATG GAGCAAATGG TGCACATCTT
GCTCTGAGAA TTATGGATTT GATTGACACC ACGAAGCCTT AA
|
|---|
| Protein sequence | MVDISVIMGS ESDRPIANRA ISVLEKSKYT YEVMVISAHR NPEELESYIS STDAKVFITI
AGLSAALPGV VASRTKRPVV GVPVSAKLGG LDALLSIAQM PPGVPVGSVG IDNGANGAHL
ALRIMDLIDT TKP
|
|---|
| |