Gene Mbar_A3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3112 
Symbol 
ID3626562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4001027 
End bp4001704 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content41% 
IMG OID637701950 
Productpotassium channel protein 
Protein accessionYP_306579 
Protein GI73670564 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0370735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.700906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAA AAGGGCACCT TATCATACTG GGATATGGAG ATGTAGGAAA AAGTATAGTA 
GACATACTTT ATGGAAGCCC ATTCCGTTTT GTAGTTGTGG ACTCGAATGA TAAGGTTTTT
GAAAATGTTG ACTTCGAACA TCTCGTTGGA AACGGTGCAG ATGAAGACAT ACTGCTTGCA
GCTGGAGTAA AGACAGCCTC CTTTGAGTTT GTGGCTCTTA ATGATGATAC CAATGTTATT
TTCGCGACTC TCATTTCCAG GAATCTGAAC CCGGAAATTA CTATTGTAGC AAGGGCAAAT
TCCGTAAAAT CGATTGAAAA GATCTACAAA GCAGGAGCCG ACTATGTGGG TTCTCTTTCA
ATAGTAGCTG GGCAGATGCT TGCCAAAATG ACTGCAAATT GCATGGGAAA AAGCTGTAGA
ATCGATGAGG ACATAATGCT TTACGAGGGC ATAGAAATCG AGAAATACCG CGTTGACAGA
GGATCTCTTC TTGATAACGT ATCAATAGAG GAACTTGATC TCGAGGGACG GATCGGATGT
ACTATAATAG GCATTGAGCG CGGAAAACTC GTTATAACAG CTATTAAAAG GCAGACAATA
ATAAGGGCAG ATGATACCAT TGCAGTTGTG GGAAGCAGCA AGCAGATTTC AGAGTTTAAG
GAAAGATATG TTAATTAA
 
Protein sequence
MKPKGHLIIL GYGDVGKSIV DILYGSPFRF VVVDSNDKVF ENVDFEHLVG NGADEDILLA 
AGVKTASFEF VALNDDTNVI FATLISRNLN PEITIVARAN SVKSIEKIYK AGADYVGSLS
IVAGQMLAKM TANCMGKSCR IDEDIMLYEG IEIEKYRVDR GSLLDNVSIE ELDLEGRIGC
TIIGIERGKL VITAIKRQTI IRADDTIAVV GSSKQISEFK ERYVN